Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC50Q8IVM0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC50Q8IVM0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC50Q8IVM0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC50Q8IVM0 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.33□□□□□ -1.24
CCDC50Q8IVM0 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL356361.1-201ENST00000400943 1459 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 RNA5SP512-201ENST00000364550 120 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL451142.1-201ENST00000375867 775 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 CDK7P1-201ENST00000434574 693 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 MRPS21P3-201ENST00000436696 262 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 SNX18P9-201ENST00000440580 835 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 RN7SL775P-201ENST00000498361 336 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 EEF1B2P2-201ENST00000519625 676 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC016144.1-201ENST00000548175 1087 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 GTF2IP6-201ENST00000583143 541 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL592504.1-201ENST00000605319 439 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC011471.4-201ENST00000638271 216 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 OR7E161P-202ENST00000641994 1033 ntBASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC50Q8IVM0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AL136531.3-201ENST00000624378 3658 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AP005139.1-201ENST00000580702 1647 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 PSMC1P2-201ENST00000423961 1204 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AL357632.1-201ENST00000426688 643 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AF274573.1-201ENST00000430535 494 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC004692.1-201ENST00000455430 424 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 CHCHD2P7-201ENST00000508008 452 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AC067852.5-201ENST00000589299 310 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 AL136139.1-201ENST00000605568 222 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 uc_338.33-201ENST00000614988 170 ntBASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CCDC50Q8IVM0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms