Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AL138899.2-201ENST00000439139 499 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 VN1R96P-201ENST00000446052 858 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC234771.3-201ENST00000454984 622 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC096922.1-201ENST00000461635 651 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 RPS7P10-201ENST00000464254 603 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 RN7SL160P-201ENST00000468558 284 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC066616.1-201ENST00000486795 413 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AP005202.1-201ENST00000489915 867 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 LDHAP1-201ENST00000509421 992 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 OR9G2P-201ENST00000533326 880 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC127071.2-201ENST00000623293 527 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AL049541.2-201ENST00000626377 555 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 MAPK10-377ENST00000642006 2752 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC090983.1-201ENST00000623426 3897 ntBASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
TRIM71Q2Q1W2 AC104964.2-201ENST00000562242 4641 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 KARSP2-201ENST00000415696 1639 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 RNA5SP85-201ENST00000365378 119 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC019178.1-201ENST00000392337 440 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 CXADRP1-201ENST00000398098 1095 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 BMP6P1-201ENST00000431230 679 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 RPS26P11-201ENST00000463445 348 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 RPL34P34-201ENST00000465389 354 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 RPS26P6-201ENST00000475156 348 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 RNA5SP287-201ENST00000516358 103 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC087752.2-201ENST00000521219 281 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 SETP17-201ENST00000534163 817 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 WBP1LP11-201ENST00000586141 328 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC009955.2-201ENST00000597288 542 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 NDUFB9P1-201ENST00000604683 510 ntBASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.67□□□□□ -1.18
TRIM71Q2Q1W2 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms