Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SSR1P43307 AL596244.1-201ENST00000567068 3779 ntBASIC7.49□□□□□ -1.21
SSR1P43307 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.49□□□□□ -1.21
SSR1P43307 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SSR1P43307 RNA5SP472-201ENST00000363868 119 ntBASIC7.49□□□□□ -1.21
SSR1P43307 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.49□□□□□ -1.21
SSR1P43307 OR5P4P-201ENST00000424698 917 ntBASIC7.49□□□□□ -1.21
SSR1P43307 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.49□□□□□ -1.21
SSR1P43307 AC073900.1-201ENST00000429766 776 ntBASIC7.49□□□□□ -1.21
SSR1P43307 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SSR1P43307 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.49□□□□□ -1.21
SSR1P43307 RN7SL228P-201ENST00000470060 303 ntBASIC7.49□□□□□ -1.21
SSR1P43307 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.49□□□□□ -1.21
SSR1P43307 PABPC1P1-201ENST00000506347 591 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.49□□□□□ -1.21
SSR1P43307 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.49□□□□□ -1.21
SSR1P43307 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.49□□□□□ -1.21
SSR1P43307 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.49□□□□□ -1.21
SSR1P43307 AC023827.2-201ENST00000566880 1061 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AC243312.1-201ENST00000570582 275 ntBASIC7.49□□□□□ -1.21
SSR1P43307 NDUFA3P1-201ENST00000588007 252 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AL023806.2-201ENST00000603042 263 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AC008385.1-201ENST00000604421 355 ntBASIC7.49□□□□□ -1.21
SSR1P43307 RN7SL778P-201ENST00000607160 297 ntBASIC7.49□□□□□ -1.21
SSR1P43307 uc_338.37-201ENST00000620113 186 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AC012254.5-201ENST00000623573 478 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AC005785.2-201ENST00000624655 631 ntBASIC7.49□□□□□ -1.21
SSR1P43307 AC073488.7-201ENST00000633785 778 ntBASIC7.49□□□□□ -1.21
SSR1P43307 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
SSR1P43307 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.49□□□□□ -1.21
SSR1P43307 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.49□□□□□ -1.21
SSR1P43307 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.49□□□□□ -1.21
SSR1P43307 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SSR1P43307 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SSR1P43307 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SSR1P43307 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.49□□□□□ -1.21
SSR1P43307 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SSR1P43307 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
SSR1P43307 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SSR1P43307 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.49□□□□□ -1.21
SSR1P43307 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.48□□□□□ -1.21
SSR1P43307 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.48□□□□□ -1.21
SSR1P43307 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.48□□□□□ -1.21
SSR1P43307 OR2W4P-201ENST00000406496 926 ntBASIC7.48□□□□□ -1.21
SSR1P43307 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.48□□□□□ -1.21
SSR1P43307 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.48□□□□□ -1.21
SSR1P43307 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.48□□□□□ -1.21
SSR1P43307 AL357632.1-201ENST00000426688 643 ntBASIC7.48□□□□□ -1.21
SSR1P43307 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 SNX18P9-201ENST00000440580 835 ntBASIC7.48□□□□□ -1.21
SSR1P43307 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.48□□□□□ -1.21
SSR1P43307 RPS4XP23-201ENST00000487801 237 ntBASIC7.48□□□□□ -1.21
SSR1P43307 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.48□□□□□ -1.21
SSR1P43307 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC7.48□□□□□ -1.21
SSR1P43307 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.48□□□□□ -1.21
SSR1P43307 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.48□□□□□ -1.21
SSR1P43307 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.48□□□□□ -1.21
SSR1P43307 IGLV1-62-201ENST00000518003 441 ntBASIC7.48□□□□□ -1.21
SSR1P43307 AC126177.6-201ENST00000550420 1009 ntBASIC7.48□□□□□ -1.21
SSR1P43307 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.48□□□□□ -1.21
SSR1P43307 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.48□□□□□ -1.21
SSR1P43307 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SSR1P43307 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SSR1P43307 AC026333.4-201ENST00000613543 544 ntBASIC7.48□□□□□ -1.21
SSR1P43307 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.48□□□□□ -1.21
SSR1P43307 CYP2G2P-201ENST00000594920 1485 ntBASIC7.48□□□□□ -1.21
SSR1P43307 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 AL117378.2-201ENST00000622916 1337 ntBASIC7.48□□□□□ -1.21
SSR1P43307 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SSR1P43307 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SSR1P43307 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SSR1P43307 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SSR1P43307 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SSR1P43307 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.47□□□□□ -1.21
SSR1P43307 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SSR1P43307 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.47□□□□□ -1.21
SSR1P43307 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
SSR1P43307 RNU6-1017P-201ENST00000363613 106 ntBASIC7.47□□□□□ -1.21
SSR1P43307 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
SSR1P43307 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.47□□□□□ -1.21
SSR1P43307 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SSR1P43307 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SSR1P43307 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.47□□□□□ -1.21
SSR1P43307 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.47□□□□□ -1.21
SSR1P43307 UQCRHP1-204ENST00000424609 274 ntBASIC7.47□□□□□ -1.21
SSR1P43307 AL161626.1-201ENST00000441480 490 ntBASIC7.47□□□□□ -1.21
SSR1P43307 AC004692.1-201ENST00000455430 424 ntBASIC7.47□□□□□ -1.21
SSR1P43307 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SSR1P43307 RPS14P8-201ENST00000478778 369 ntBASIC7.47□□□□□ -1.21
SSR1P43307 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.47□□□□□ -1.21
SSR1P43307 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.47□□□□□ -1.21
SSR1P43307 AC008417.1-201ENST00000510014 565 ntBASIC7.47□□□□□ -1.21
SSR1P43307 EIF3KP1-201ENST00000513279 656 ntBASIC7.47□□□□□ -1.21
SSR1P43307 AC068790.1-201ENST00000536166 355 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms