Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC018804.1-201ENST00000430381 618 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 RBMY3AP-201ENST00000449381 1145 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AL929410.2-201ENST00000451170 189 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 BX323845.2-201ENST00000458382 234 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 RN7SL456P-201ENST00000469290 295 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 PGBD4P1-201ENST00000473644 407 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC095057.1-201ENST00000507583 168 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC106800.2-201ENST00000514009 1103 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 IGLVV-66-201ENST00000523818 341 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC091304.5-201ENST00000568969 158 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 GTF2IP6-201ENST00000583143 541 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC012511.1-201ENST00000608140 449 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AP005212.3-201ENST00000619964 528 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 AP003072.5-201ENST00000623872 773 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 HSPD1P4-201ENST00000547203 1702 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DOBP13765 OR6M2P-202ENST00000641780 2063 ntBASIC6.21□□□□□ -1.42
HLA-DOBP13765 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DOBP13765 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 RNU6-167P-201ENST00000384292 106 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 RNA5SP53-201ENST00000391299 120 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL359715.1-201ENST00000404330 555 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 RN7SKP137-201ENST00000411074 307 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 DUTP4-201ENST00000424782 475 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC079193.1-201ENST00000460497 588 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 RN7SL149P-201ENST00000465197 281 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 RN7SL379P-201ENST00000479912 293 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC026826.1-201ENST00000493002 361 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 RN7SKP242-201ENST00000515967 289 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 SNORA48.9-201ENST00000516419 162 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 FXNP1-201ENST00000555153 337 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AC100814.1-201ENST00000606963 623 ntBASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DOBP13765 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms