Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RB1P06400 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 MAPK10-357ENST00000641831 2858 ntBASIC7.45□□□□□ -1.22
RB1P06400 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 LARP1P1-201ENST00000407692 292 ntBASIC7.45□□□□□ -1.22
RB1P06400 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.45□□□□□ -1.22
RB1P06400 AL139158.1-201ENST00000424719 340 ntBASIC7.45□□□□□ -1.22
RB1P06400 GAPDHP51-201ENST00000426454 1000 ntBASIC7.45□□□□□ -1.22
RB1P06400 OR6R1P-201ENST00000431838 940 ntBASIC7.45□□□□□ -1.22
RB1P06400 BTG3P1-201ENST00000435859 716 ntBASIC7.45□□□□□ -1.22
RB1P06400 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.45□□□□□ -1.22
RB1P06400 RN7SL654P-201ENST00000479178 292 ntBASIC7.45□□□□□ -1.22
RB1P06400 RPS27P20-201ENST00000492051 246 ntBASIC7.45□□□□□ -1.22
RB1P06400 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.45□□□□□ -1.22
RB1P06400 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.45□□□□□ -1.22
RB1P06400 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 AP005329.3-201ENST00000609924 686 ntBASIC7.45□□□□□ -1.22
RB1P06400 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.45□□□□□ -1.22
RB1P06400 AC073592.6-201ENST00000624271 415 ntBASIC7.45□□□□□ -1.22
RB1P06400 AL121936.2-201ENST00000641935 662 ntBASIC7.45□□□□□ -1.22
RB1P06400 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
RB1P06400 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.45□□□□□ -1.22
RB1P06400 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.44□□□□□ -1.22
RB1P06400 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 STAG3L4-201ENST00000352103 530 ntBASIC7.44□□□□□ -1.22
RB1P06400 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.44□□□□□ -1.22
RB1P06400 GAPDHP20-201ENST00000444107 1007 ntBASIC7.44□□□□□ -1.22
RB1P06400 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.44□□□□□ -1.22
RB1P06400 RPL34P34-201ENST00000465389 354 ntBASIC7.44□□□□□ -1.22
RB1P06400 AC104339.1-201ENST00000465478 348 ntBASIC7.44□□□□□ -1.22
RB1P06400 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC7.44□□□□□ -1.22
RB1P06400 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 AC011853.1-201ENST00000518911 454 ntBASIC7.44□□□□□ -1.22
RB1P06400 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.44□□□□□ -1.22
RB1P06400 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
RB1P06400 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RB1P06400 UBE2CP1-201ENST00000557130 554 ntBASIC7.44□□□□□ -1.22
RB1P06400 AC026826.3-201ENST00000561747 158 ntBASIC7.44□□□□□ -1.22
RB1P06400 AC007255.2-201ENST00000604053 631 ntBASIC7.44□□□□□ -1.22
RB1P06400 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.44□□□□□ -1.22
RB1P06400 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.44□□□□□ -1.22
RB1P06400 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.44□□□□□ -1.22
RB1P06400 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RB1P06400 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RB1P06400 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.44□□□□□ -1.22
RB1P06400 AC123912.3-201ENST00000600907 1367 ntBASIC7.44□□□□□ -1.22
RB1P06400 AL133320.1-201ENST00000621423 2352 ntBASIC7.44□□□□□ -1.22
RB1P06400 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RB1P06400 NF1P8-201ENST00000415351 1461 ntBASIC7.43□□□□□ -1.22
RB1P06400 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RB1P06400 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.43□□□□□ -1.22
RB1P06400 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 KARSP2-201ENST00000415696 1639 ntBASIC7.43□□□□□ -1.22
RB1P06400 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RB1P06400 OR51A10P-201ENST00000307165 937 ntBASIC7.43□□□□□ -1.22
RB1P06400 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RB1P06400 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.43□□□□□ -1.22
RB1P06400 VN1R66P-201ENST00000412929 916 ntBASIC7.43□□□□□ -1.22
RB1P06400 MTND6P1-201ENST00000417434 424 ntBASIC7.43□□□□□ -1.22
RB1P06400 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.43□□□□□ -1.22
RB1P06400 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.43□□□□□ -1.22
RB1P06400 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.43□□□□□ -1.22
RB1P06400 AC097359.1-201ENST00000447946 463 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms