Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 AC006970.2-201ENST00000450065 779 ntBASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC40Q9H9A6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 BX276092.2-201ENST00000417668 665 ntBASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC40Q9H9A6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 AL121832.2-201ENST00000610979 668 ntBASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 AC125437.2-201ENST00000625180 2167 ntBASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC40Q9H9A6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC40Q9H9A6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC40Q9H9A6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC40Q9H9A6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms