Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.96■□□□□ 0.95
SMOQ99835 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMOQ99835 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SMOQ99835 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.95■□□□□ 0.94
SMOQ99835 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMOQ99835 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.95■□□□□ 0.94
SMOQ99835 KRASP1-201ENST00000407852 552 ntBASIC20.95■□□□□ 0.94
SMOQ99835 AC239809.2-201ENST00000415381 517 ntBASIC20.95■□□□□ 0.94
SMOQ99835 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.95■□□□□ 0.94
SMOQ99835 AC133681.1-201ENST00000465482 601 ntBASIC20.95■□□□□ 0.94
SMOQ99835 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.95■□□□□ 0.94
SMOQ99835 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.95■□□□□ 0.94
SMOQ99835 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.95■□□□□ 0.94
SMOQ99835 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SMOQ99835 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SMOQ99835 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.95■□□□□ 0.94
SMOQ99835 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMOQ99835 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.94■□□□□ 0.94
SMOQ99835 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.94■□□□□ 0.94
SMOQ99835 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.94■□□□□ 0.94
SMOQ99835 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.94■□□□□ 0.94
SMOQ99835 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.94■□□□□ 0.94
SMOQ99835 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.94■□□□□ 0.94
SMOQ99835 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.94■□□□□ 0.94
SMOQ99835 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.94■□□□□ 0.94
SMOQ99835 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.94■□□□□ 0.94
SMOQ99835 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMOQ99835 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.93■□□□□ 0.94
SMOQ99835 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.93■□□□□ 0.94
SMOQ99835 PRKY-204ENST00000533551 1019 ntBASIC20.93■□□□□ 0.94
SMOQ99835 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.93■□□□□ 0.94
SMOQ99835 FAM197Y4-202ENST00000622692 608 ntBASIC20.93■□□□□ 0.94
SMOQ99835 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.93■□□□□ 0.94
SMOQ99835 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMOQ99835 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 AC116351.2-201ENST00000606540 1585 ntBASIC20.93■□□□□ 0.94
SMOQ99835 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMOQ99835 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.93■□□□□ 0.94
SMOQ99835 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.92■□□□□ 0.94
SMOQ99835 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 AC099778.1-201ENST00000568593 1911 ntBASIC20.92■□□□□ 0.94
SMOQ99835 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SMOQ99835 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.92■□□□□ 0.94
SMOQ99835 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.92■□□□□ 0.94
SMOQ99835 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMOQ99835 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.92■□□□□ 0.94
SMOQ99835 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.92■□□□□ 0.94
SMOQ99835 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SMOQ99835 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SMOQ99835 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.92■□□□□ 0.94
SMOQ99835 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.92■□□□□ 0.94
SMOQ99835 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMOQ99835 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms