Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.09■□□□□ 0.49
SPENQ96T58 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.09■□□□□ 0.49
SPENQ96T58 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.09■□□□□ 0.49
SPENQ96T58 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.08■□□□□ 0.49
SPENQ96T58 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.08■□□□□ 0.49
SPENQ96T58 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPENQ96T58 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
SPENQ96T58 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPENQ96T58 AL031133.1-201ENST00000406807 723 ntBASIC18.08■□□□□ 0.49
SPENQ96T58 B3GAT3P1-201ENST00000471720 806 ntBASIC18.08■□□□□ 0.49
SPENQ96T58 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SPENQ96T58 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.08■□□□□ 0.49
SPENQ96T58 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPENQ96T58 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPENQ96T58 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPENQ96T58 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
SPENQ96T58 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPENQ96T58 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SPENQ96T58 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
SPENQ96T58 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPENQ96T58 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPENQ96T58 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SPENQ96T58 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPENQ96T58 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPENQ96T58 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.08■□□□□ 0.48
SPENQ96T58 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.08■□□□□ 0.48
SPENQ96T58 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPENQ96T58 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPENQ96T58 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.08■□□□□ 0.48
SPENQ96T58 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.08■□□□□ 0.48
SPENQ96T58 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.08■□□□□ 0.48
SPENQ96T58 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.07■□□□□ 0.48
SPENQ96T58 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 AC022616.7-201ENST00000525383 220 ntBASIC18.07■□□□□ 0.48
SPENQ96T58 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.07■□□□□ 0.48
SPENQ96T58 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SPENQ96T58 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.07■□□□□ 0.48
SPENQ96T58 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPENQ96T58 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.07■□□□□ 0.48
SPENQ96T58 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.06■□□□□ 0.48
SPENQ96T58 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.06■□□□□ 0.48
SPENQ96T58 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SPENQ96T58 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SPENQ96T58 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SPENQ96T58 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SPENQ96T58 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.06■□□□□ 0.48
SPENQ96T58 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.06■□□□□ 0.48
SPENQ96T58 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.06■□□□□ 0.48
SPENQ96T58 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.06■□□□□ 0.48
SPENQ96T58 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.06■□□□□ 0.48
SPENQ96T58 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.06■□□□□ 0.48
SPENQ96T58 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPENQ96T58 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 AC023632.3-201ENST00000521633 145 ntBASIC18.05■□□□□ 0.48
SPENQ96T58 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 AL358472.4-201ENST00000633140 710 ntBASIC18.05■□□□□ 0.48
SPENQ96T58 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SPENQ96T58 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.05■□□□□ 0.48
SPENQ96T58 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 AL121906.2-201ENST00000621597 723 ntBASIC18.05■□□□□ 0.48
SPENQ96T58 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.05■□□□□ 0.48
SPENQ96T58 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPENQ96T58 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.04■□□□□ 0.48
SPENQ96T58 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.04■□□□□ 0.48
SPENQ96T58 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.04■□□□□ 0.48
SPENQ96T58 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms