Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF34Q969K3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF34Q969K3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF34Q969K3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF34Q969K3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF34Q969K3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF34Q969K3 SOX15-203ENST00000570788 1093 ntBASIC20.84■□□□□ 0.93
RNF34Q969K3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF34Q969K3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF34Q969K3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF34Q969K3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF34Q969K3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF34Q969K3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF34Q969K3 UNC93B5-201ENST00000530315 699 ntBASIC20.83■□□□□ 0.93
RNF34Q969K3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF34Q969K3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF34Q969K3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RNF34Q969K3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF34Q969K3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF34Q969K3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF34Q969K3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF34Q969K3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF34Q969K3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF34Q969K3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
RNF34Q969K3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF34Q969K3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF34Q969K3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF34Q969K3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RNF34Q969K3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF34Q969K3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RNF34Q969K3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF34Q969K3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF34Q969K3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF34Q969K3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF34Q969K3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF34Q969K3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF34Q969K3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF34Q969K3 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.81■□□□□ 0.92
RNF34Q969K3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF34Q969K3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RNF34Q969K3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF34Q969K3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF34Q969K3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF34Q969K3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF34Q969K3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
RNF34Q969K3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF34Q969K3 UNC93B4-201ENST00000505679 747 ntBASIC20.8■□□□□ 0.92
RNF34Q969K3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
RNF34Q969K3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF34Q969K3 AL391422.3-201ENST00000603791 2761 ntBASIC20.8■□□□□ 0.92
RNF34Q969K3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RNF34Q969K3 LINC01521-201ENST00000504184 1943 ntBASIC20.8■□□□□ 0.92
RNF34Q969K3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF34Q969K3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF34Q969K3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF34Q969K3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF34Q969K3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF34Q969K3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF34Q969K3 KRT16P6-202ENST00000425692 1426 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms