Protein–RNA interactions for Protein: Q8TGJ3

KSH1, Protein kish, yeastyeast

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KSH1Q8TGJ3 BIL1YOR304C-A 231 nt-2.98□□□□□ -2.89
KSH1Q8TGJ3 YOR381W-AYOR381W-A 168 nt-2.98□□□□□ -2.89
KSH1Q8TGJ3 YFL019CYFL019C 354 nt-3□□□□□ -2.89
KSH1Q8TGJ3 ATP19YOL077W-A 207 nt-3.01□□□□□ -2.89
KSH1Q8TGJ3 YGL041CYGL041C 204 nt-3.03□□□□□ -2.89
KSH1Q8TGJ3 YOR309CYOR309C 381 nt-3.03□□□□□ -2.89
KSH1Q8TGJ3 YBR178WYBR178W 375 nt-3.04□□□□□ -2.9
KSH1Q8TGJ3 YBR182C-AYBR182C-A 195 nt-3.12□□□□□ -2.91
KSH1Q8TGJ3 YOL013W-BYOL013W-B 291 nt-3.14□□□□□ -2.91
KSH1Q8TGJ3 YMR172C-AYMR172C-A 384 nt-3.17□□□□□ -2.92
KSH1Q8TGJ3 YOR376W-AYOR376W-A 156 nt-3.19□□□□□ -2.92
KSH1Q8TGJ3 YAL016C-BYAL016C-B 186 nt-3.2□□□□□ -2.92
KSH1Q8TGJ3 YJR157WYJR157W 363 nt-3.2□□□□□ -2.92
KSH1Q8TGJ3 YBR196C-AYBR196C-A 150 nt-3.21□□□□□ -2.92
KSH1Q8TGJ3 YEL014CYEL014C 306 nt-3.22□□□□□ -2.92
KSH1Q8TGJ3 YOR329W-AYOR329W-A 210 nt-3.22□□□□□ -2.92
KSH1Q8TGJ3 YOL083C-AYOL083C-A 141 nt-3.25□□□□□ -2.93
KSH1Q8TGJ3 YAL063C-AYAL063C-A 291 nt-3.28□□□□□ -2.93
KSH1Q8TGJ3 YLR299C-AYLR299C-A 93 nt-3.29□□□□□ -2.94
KSH1Q8TGJ3 YLR342W-AYLR342W-A 174 nt-3.3□□□□□ -2.94
KSH1Q8TGJ3 snR78snR78 87 nt-3.32□□□□□ -2.94
KSH1Q8TGJ3 YNR025CYNR025C 360 nt-3.32□□□□□ -2.94
KSH1Q8TGJ3 YGR035CYGR035C 351 nt-3.34□□□□□ -2.94
KSH1Q8TGJ3 YDR524W-CYDR524W-C 90 nt-3.35□□□□□ -2.95
KSH1Q8TGJ3 YJR162CYJR162C 351 nt-3.37□□□□□ -2.95
KSH1Q8TGJ3 YNL337WYNL337W 255 nt-3.37□□□□□ -2.95
KSH1Q8TGJ3 YOR316C-AYOR316C-A 210 nt-3.39□□□□□ -2.95
KSH1Q8TGJ3 YDR183C-AYDR183C-A 258 nt-3.44□□□□□ -2.96
KSH1Q8TGJ3 YHR180C-BYHR180C-B 105 nt-3.45□□□□□ -2.96
KSH1Q8TGJ3 YLR222C-AYLR222C-A 231 nt-3.5□□□□□ -2.97
KSH1Q8TGJ3 YOR102WYOR102W 351 nt-3.5□□□□□ -2.97
KSH1Q8TGJ3 YER181CYER181C 324 nt-3.52□□□□□ -2.97
KSH1Q8TGJ3 YBR131C-AYBR131C-A 90 nt-3.55□□□□□ -2.98
KSH1Q8TGJ3 snR55snR55 98 nt-3.56□□□□□ -2.98
KSH1Q8TGJ3 tF(GAA)QtF(GAA)Q 75 nt-3.58□□□□□ -2.98
KSH1Q8TGJ3 YKL106C-AYKL106C-A 120 nt-3.59□□□□□ -2.98
KSH1Q8TGJ3 snR48snR48 113 nt-3.62□□□□□ -2.99
KSH1Q8TGJ3 YPR012WYPR012W 255 nt-3.64□□□□□ -2.99
KSH1Q8TGJ3 YDR413CYDR413C 576 nt-3.66□□□□□ -3
KSH1Q8TGJ3 YPR197CYPR197C 564 nt-3.66□□□□□ -3
KSH1Q8TGJ3 YGL188C-AYGL188C-A 141 nt-3.67□□□□□ -3
KSH1Q8TGJ3 YPL038W-AYPL038W-A 192 nt-3.67□□□□□ -3
KSH1Q8TGJ3 YKL118WYKL118W 312 nt-3.74□□□□□ -3.01
KSH1Q8TGJ3 YNL097C-BYNL097C-B 123 nt-3.79□□□□□ -3.02
KSH1Q8TGJ3 tL(UAA)QtL(UAA)Q 85 nt-3.8□□□□□ -3.02
KSH1Q8TGJ3 tR(UCU)Q1tR(UCU)Q1 73 nt-3.86□□□□□ -3.03
KSH1Q8TGJ3 RPL39YJL189W 156 nt-3.88□□□□□ -3.03
KSH1Q8TGJ3 YJL150WYJL150W 303 nt-3.89□□□□□ -3.03
KSH1Q8TGJ3 snR6snR6 112 nt-3.91□□□□□ -3.04
KSH1Q8TGJ3 YBR109W-AYBR109W-A 225 nt-3.95□□□□□ -3.04
KSH1Q8TGJ3 YNL277W-AYNL277W-A 189 nt-3.99□□□□□ -3.05
KSH1Q8TGJ3 YEL050W-AYEL050W-A 192 nt-4.01□□□□□ -3.05
KSH1Q8TGJ3 YHL015W-AYHL015W-A 84 nt-4.04□□□□□ -3.06
KSH1Q8TGJ3 YOL155W-AYOL155W-A 135 nt-4.05□□□□□ -3.06
KSH1Q8TGJ3 snR80snR80 171 nt-4.06□□□□□ -3.06
KSH1Q8TGJ3 YBR296C-AYBR296C-A 120 nt-4.06□□□□□ -3.06
KSH1Q8TGJ3 snR73snR73 106 nt-4.1□□□□□ -3.07
KSH1Q8TGJ3 YDR524C-AYDR524C-A 120 nt-4.1□□□□□ -3.07
KSH1Q8TGJ3 RPL41BYDL133C-A 78 nt-4.11□□□□□ -3.07
KSH1Q8TGJ3 snR56snR56 88 nt-4.12□□□□□ -3.07
KSH1Q8TGJ3 GIM4YEL003W 336 nt-4.12□□□□□ -3.07
KSH1Q8TGJ3 YOR335W-AYOR335W-A 81 nt-4.12□□□□□ -3.07
KSH1Q8TGJ3 RPL41AYDL184C 78 nt-4.13□□□□□ -3.07
KSH1Q8TGJ3 YNL198CYNL198C 303 nt-4.16□□□□□ -3.08
KSH1Q8TGJ3 snR52snR52 92 nt-4.21□□□□□ -3.08
KSH1Q8TGJ3 YOR302WYOR302W 78 nt-4.24□□□□□ -3.09
KSH1Q8TGJ3 YDL240C-AYDL240C-A 138 nt-4.28□□□□□ -3.09
KSH1Q8TGJ3 snR38snR38 95 nt-4.36□□□□□ -3.11
KSH1Q8TGJ3 SOM1YEL059C-A 225 nt-4.38□□□□□ -3.11
KSH1Q8TGJ3 YDR157WYDR157W 402 nt-4.39□□□□□ -3.11
KSH1Q8TGJ3 YDR406W-AYDR406W-A 246 nt-4.5□□□□□ -3.13
KSH1Q8TGJ3 YCR095W-AYCR095W-A 159 nt-4.55□□□□□ -3.14
KSH1Q8TGJ3 YPL152W-AYPL152W-A 99 nt-4.58□□□□□ -3.14
KSH1Q8TGJ3 YBL071C-BYBL071C-B 99 nt-4.7□□□□□ -3.16
KSH1Q8TGJ3 YOL164W-AYOL164W-A 183 nt-4.72□□□□□ -3.17
KSH1Q8TGJ3 snR85snR85 171 nt-4.73□□□□□ -3.17
KSH1Q8TGJ3 YGR151CYGR151C 336 nt-4.75□□□□□ -3.17
KSH1Q8TGJ3 snR65snR65 100 nt-4.77□□□□□ -3.17
KSH1Q8TGJ3 YDR118W-AYDR118W-A 117 nt-4.77□□□□□ -3.17
KSH1Q8TGJ3 YDL114W-AYDL114W-A 114 nt-4.79□□□□□ -3.18
KSH1Q8TGJ3 tV(UAC)QtV(UAC)Q 76 nt-4.8□□□□□ -3.18
KSH1Q8TGJ3 snR47snR47 99 nt-4.82□□□□□ -3.18
KSH1Q8TGJ3 YBL100W-CYBL100W-C 120 nt-4.9□□□□□ -3.19
KSH1Q8TGJ3 snR87snR87 109 nt-4.94□□□□□ -3.2
KSH1Q8TGJ3 YBL053WYBL053W 375 nt-4.94□□□□□ -3.2
KSH1Q8TGJ3 YAL037C-AYAL037C-A 93 nt-4.97□□□□□ -3.21
KSH1Q8TGJ3 Q0017Q0017 162 nt-5□□□□□ -3.21
KSH1Q8TGJ3 YKL225WYKL225W 348 nt-5.09□□□□□ -3.22
KSH1Q8TGJ3 YJL136W-AYJL136W-A 84 nt-5.16□□□□□ -3.24
KSH1Q8TGJ3 SPG3YDR504C 384 nt-5.17□□□□□ -3.24
KSH1Q8TGJ3 VAR1Q0140 1197 nt-5.25□□□□□ -3.25
KSH1Q8TGJ3 tS(GCU)Q1tS(GCU)Q1 86 nt-5.33□□□□□ -3.26
KSH1Q8TGJ3 YHR175W-AYHR175W-A 150 nt-5.39□□□□□ -3.27
KSH1Q8TGJ3 YKL096C-BYKL096C-B 150 nt-5.41□□□□□ -3.28
KSH1Q8TGJ3 YOR231C-AYOR231C-A 201 nt-5.43□□□□□ -3.28
KSH1Q8TGJ3 snR58snR58 96 nt-5.44□□□□□ -3.28
KSH1Q8TGJ3 YCL001W-BYCL001W-B 255 nt-5.5□□□□□ -3.29
KSH1Q8TGJ3 YGR122C-AYGR122C-A 129 nt-5.55□□□□□ -3.3
KSH1Q8TGJ3 YDR034C-AYDR034C-A 177 nt-5.67□□□□□ -3.32
KSH1Q8TGJ3 YDL159W-AYDL159W-A 132 nt-5.73□□□□□ -3.33
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms