Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDCD4Q53EL6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 KRT18P61-201ENST00000585825 1298 ntBASIC19.12■□□□□ 0.65
PDCD4Q53EL6 AL591742.1-201ENST00000604433 565 ntBASIC19.12■□□□□ 0.65
PDCD4Q53EL6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.12■□□□□ 0.65
PDCD4Q53EL6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 PTBP1P-201ENST00000554374 1601 ntBASIC19.11■□□□□ 0.65
PDCD4Q53EL6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 AP000974.1-201ENST00000623909 2387 ntBASIC19.11■□□□□ 0.65
PDCD4Q53EL6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.11■□□□□ 0.65
PDCD4Q53EL6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDCD4Q53EL6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 TERF1P5-201ENST00000477545 1207 ntBASIC19.1■□□□□ 0.65
PDCD4Q53EL6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDCD4Q53EL6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 MIR638-201ENST00000385237 100 ntBASIC19.09■□□□□ 0.65
PDCD4Q53EL6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.09■□□□□ 0.65
PDCD4Q53EL6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms