Protein–RNA interactions for Protein: Q3E7B6

VMA9, V-type proton ATPase subunit e, yeastyeast

Predictions only

Length 73 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA9Q3E7B6 YNL028WYNL028W 318 nt-5.12□□□□□ -3.23
VMA9Q3E7B6 YNL324WYNL324W 396 nt-5.12□□□□□ -3.23
VMA9Q3E7B6 YPR012WYPR012W 255 nt-5.12□□□□□ -3.23
VMA9Q3E7B6 YER181CYER181C 324 nt-5.13□□□□□ -3.23
VMA9Q3E7B6 YOL166W-AYOL166W-A 156 nt-5.13□□□□□ -3.23
VMA9Q3E7B6 Q0142Q0142 177 nt-5.16□□□□□ -3.24
VMA9Q3E7B6 YGL041CYGL041C 204 nt-5.17□□□□□ -3.24
VMA9Q3E7B6 YAL016C-BYAL016C-B 186 nt-5.17□□□□□ -3.24
VMA9Q3E7B6 snR6snR6 112 nt-5.19□□□□□ -3.24
VMA9Q3E7B6 YLR412C-AYLR412C-A 207 nt-5.19□□□□□ -3.24
VMA9Q3E7B6 YKL106C-AYKL106C-A 120 nt-5.2□□□□□ -3.24
VMA9Q3E7B6 YOL155W-AYOL155W-A 135 nt-5.22□□□□□ -3.25
VMA9Q3E7B6 snR78snR78 87 nt-5.23□□□□□ -3.25
VMA9Q3E7B6 YER006C-AYER006C-A 318 nt-5.24□□□□□ -3.25
VMA9Q3E7B6 YMR001C-AYMR001C-A 231 nt-5.24□□□□□ -3.25
VMA9Q3E7B6 YOR329W-AYOR329W-A 210 nt-5.24□□□□□ -3.25
VMA9Q3E7B6 YLR120W-AYLR120W-A 102 nt-5.25□□□□□ -3.25
VMA9Q3E7B6 YLR434CYLR434C 384 nt-5.34□□□□□ -3.26
VMA9Q3E7B6 YEL014CYEL014C 306 nt-5.37□□□□□ -3.27
VMA9Q3E7B6 snR73snR73 106 nt-5.39□□□□□ -3.27
VMA9Q3E7B6 YDR524C-AYDR524C-A 120 nt-5.39□□□□□ -3.27
VMA9Q3E7B6 tW(UCA)QtW(UCA)Q 74 nt-5.45□□□□□ -3.28
VMA9Q3E7B6 YOR335W-AYOR335W-A 81 nt-5.47□□□□□ -3.29
VMA9Q3E7B6 snR80snR80 171 nt-5.48□□□□□ -3.29
VMA9Q3E7B6 YJL150WYJL150W 303 nt-5.48□□□□□ -3.29
VMA9Q3E7B6 YAL066WYAL066W 309 nt-5.48□□□□□ -3.29
VMA9Q3E7B6 HTL1YCR020W-B 237 nt-5.49□□□□□ -3.29
VMA9Q3E7B6 YLR222C-AYLR222C-A 231 nt-5.51□□□□□ -3.29
VMA9Q3E7B6 STE18YJR086W 333 nt-5.56□□□□□ -3.3
VMA9Q3E7B6 YDR413CYDR413C 576 nt-5.57□□□□□ -3.3
VMA9Q3E7B6 RPL41BYDL133C-A 78 nt-5.58□□□□□ -3.3
VMA9Q3E7B6 YOL038C-AYOL038C-A 96 nt-5.62□□□□□ -3.31
VMA9Q3E7B6 YOR102WYOR102W 351 nt-5.67□□□□□ -3.32
VMA9Q3E7B6 BIL1YOR304C-A 231 nt-5.72□□□□□ -3.33
VMA9Q3E7B6 YJR162CYJR162C 351 nt-5.73□□□□□ -3.33
VMA9Q3E7B6 YNL337WYNL337W 255 nt-5.73□□□□□ -3.33
VMA9Q3E7B6 YBR109W-AYBR109W-A 225 nt-5.75□□□□□ -3.33
VMA9Q3E7B6 YNL122CYNL122C 348 nt-5.89□□□□□ -3.35
VMA9Q3E7B6 YGL188C-AYGL188C-A 141 nt-5.91□□□□□ -3.36
VMA9Q3E7B6 snR48snR48 113 nt-5.94□□□□□ -3.36
VMA9Q3E7B6 YBR131C-AYBR131C-A 90 nt-5.96□□□□□ -3.36
VMA9Q3E7B6 YJL047C-AYJL047C-A 135 nt-6.01□□□□□ -3.37
VMA9Q3E7B6 YKL118WYKL118W 312 nt-6.05□□□□□ -3.38
VMA9Q3E7B6 YBR296C-AYBR296C-A 120 nt-6.05□□□□□ -3.38
VMA9Q3E7B6 Q0255Q0255 1419 nt-6.07□□□□□ -3.38
VMA9Q3E7B6 tL(UAA)QtL(UAA)Q 85 nt-6.1□□□□□ -3.39
VMA9Q3E7B6 YNL198CYNL198C 303 nt-6.12□□□□□ -3.39
VMA9Q3E7B6 RPL41AYDL184C 78 nt-6.15□□□□□ -3.39
VMA9Q3E7B6 tF(GAA)QtF(GAA)Q 75 nt-6.17□□□□□ -3.4
VMA9Q3E7B6 YKL123WYKL123W 381 nt-6.21□□□□□ -3.4
VMA9Q3E7B6 YPL038W-AYPL038W-A 192 nt-6.24□□□□□ -3.41
VMA9Q3E7B6 GIM4YEL003W 336 nt-6.25□□□□□ -3.41
VMA9Q3E7B6 YNL097C-BYNL097C-B 123 nt-6.25□□□□□ -3.41
VMA9Q3E7B6 YGR035CYGR035C 351 nt-6.28□□□□□ -3.41
VMA9Q3E7B6 YDR183C-AYDR183C-A 258 nt-6.29□□□□□ -3.42
VMA9Q3E7B6 YAL063C-AYAL063C-A 291 nt-6.3□□□□□ -3.42
VMA9Q3E7B6 snR87snR87 109 nt-6.32□□□□□ -3.42
VMA9Q3E7B6 snR38snR38 95 nt-6.34□□□□□ -3.42
VMA9Q3E7B6 snR56snR56 88 nt-6.35□□□□□ -3.43
VMA9Q3E7B6 YDR406W-AYDR406W-A 246 nt-6.35□□□□□ -3.43
VMA9Q3E7B6 snR85snR85 171 nt-6.6□□□□□ -3.47
VMA9Q3E7B6 YHL015W-AYHL015W-A 84 nt-6.6□□□□□ -3.47
VMA9Q3E7B6 YLR285C-AYLR285C-A 171 nt-6.6□□□□□ -3.47
VMA9Q3E7B6 tV(UAC)QtV(UAC)Q 76 nt-6.74□□□□□ -3.49
VMA9Q3E7B6 RPL39YJL189W 156 nt-6.79□□□□□ -3.5
VMA9Q3E7B6 YDL114W-AYDL114W-A 114 nt-6.8□□□□□ -3.5
VMA9Q3E7B6 YCR095W-AYCR095W-A 159 nt-6.9□□□□□ -3.51
VMA9Q3E7B6 SOM1YEL059C-A 225 nt-6.93□□□□□ -3.52
VMA9Q3E7B6 snR52snR52 92 nt-6.94□□□□□ -3.52
VMA9Q3E7B6 YNL277W-AYNL277W-A 189 nt-6.96□□□□□ -3.52
VMA9Q3E7B6 YNR025CYNR025C 360 nt-7.02□□□□□ -3.53
VMA9Q3E7B6 YBL071C-BYBL071C-B 99 nt-7.08□□□□□ -3.54
VMA9Q3E7B6 YOR302WYOR302W 78 nt-7.09□□□□□ -3.54
VMA9Q3E7B6 YOL164W-AYOL164W-A 183 nt-7.1□□□□□ -3.55
VMA9Q3E7B6 YDR157WYDR157W 402 nt-7.16□□□□□ -3.56
VMA9Q3E7B6 YDR118W-AYDR118W-A 117 nt-7.18□□□□□ -3.56
VMA9Q3E7B6 snR47snR47 99 nt-7.18□□□□□ -3.56
VMA9Q3E7B6 snR58snR58 96 nt-7.26□□□□□ -3.57
VMA9Q3E7B6 YGR151CYGR151C 336 nt-7.3□□□□□ -3.58
VMA9Q3E7B6 YKL096C-BYKL096C-B 150 nt-7.34□□□□□ -3.58
VMA9Q3E7B6 SPG3YDR504C 384 nt-7.41□□□□□ -3.6
VMA9Q3E7B6 YBL053WYBL053W 375 nt-7.44□□□□□ -3.6
VMA9Q3E7B6 YBL100W-CYBL100W-C 120 nt-7.45□□□□□ -3.6
VMA9Q3E7B6 YKL225WYKL225W 348 nt-7.47□□□□□ -3.61
VMA9Q3E7B6 YJL136W-AYJL136W-A 84 nt-7.5□□□□□ -3.61
VMA9Q3E7B6 YAL037C-AYAL037C-A 93 nt-7.59□□□□□ -3.62
VMA9Q3E7B6 YHR175W-AYHR175W-A 150 nt-7.64□□□□□ -3.63
VMA9Q3E7B6 YDL240C-AYDL240C-A 138 nt-7.72□□□□□ -3.65
VMA9Q3E7B6 tS(GCU)Q1tS(GCU)Q1 86 nt-7.82□□□□□ -3.66
VMA9Q3E7B6 YPL152W-AYPL152W-A 99 nt-7.84□□□□□ -3.66
VMA9Q3E7B6 YDL159W-AYDL159W-A 132 nt-7.91□□□□□ -3.68
VMA9Q3E7B6 YDR034C-AYDR034C-A 177 nt-7.96□□□□□ -3.68
VMA9Q3E7B6 YGR122C-AYGR122C-A 129 nt-7.96□□□□□ -3.68
VMA9Q3E7B6 YEL050W-AYEL050W-A 192 nt-8.08□□□□□ -3.7
VMA9Q3E7B6 YNL170WYNL170W 396 nt-8.17□□□□□ -3.72
VMA9Q3E7B6 tR(UCU)Q1tR(UCU)Q1 73 nt-8.24□□□□□ -3.73
VMA9Q3E7B6 snR65snR65 100 nt-8.28□□□□□ -3.73
VMA9Q3E7B6 tC(GCA)QtC(GCA)Q 76 nt-8.4□□□□□ -3.75
VMA9Q3E7B6 YCL001W-BYCL001W-B 255 nt-8.58□□□□□ -3.78
VMA9Q3E7B6 YGL007C-AYGL007C-A 87 nt-8.6□□□□□ -3.79
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms