Protein–RNA interactions for Protein: Q07528

ATG20, Autophagy-related protein 20, yeastyeast

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG20Q07528 YML054C-AYML054C-A 159 nt1.65□□□□□ -2.15
ATG20Q07528 RPL41AYDL184C 78 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)E1tH(GUG)E1 72 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)E2tH(GUG)E2 72 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)G1tH(GUG)G1 72 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)G2tH(GUG)G2 72 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)HtH(GUG)H 72 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)KtH(GUG)K 72 nt1.64□□□□□ -2.15
ATG20Q07528 tH(GUG)MtH(GUG)M 72 nt1.64□□□□□ -2.15
ATG20Q07528 YJL077W-AYJL077W-A 87 nt1.63□□□□□ -2.15
ATG20Q07528 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
ATG20Q07528 YBR296C-AYBR296C-A 120 nt1.62□□□□□ -2.15
ATG20Q07528 YLL006W-AYLL006W-A 177 nt1.6□□□□□ -2.15
ATG20Q07528 SIP4YJL089W 2490 nt1.59□□□□□ -2.15
ATG20Q07528 YLR149C-AYLR149C-A 87 nt1.59□□□□□ -2.15
ATG20Q07528 BUL2YML111W 2763 nt1.59□□□□□ -2.16
ATG20Q07528 NIP1YMR309C 2439 nt1.58□□□□□ -2.16
ATG20Q07528 snR38snR38 95 nt1.58□□□□□ -2.16
ATG20Q07528 YKL096C-BYKL096C-B 150 nt1.57□□□□□ -2.16
ATG20Q07528 AI1Q0050 2505 nt1.54□□□□□ -2.16
ATG20Q07528 tV(UAC)BtV(UAC)B 74 nt1.54□□□□□ -2.16
ATG20Q07528 tV(UAC)DtV(UAC)D 74 nt1.54□□□□□ -2.16
ATG20Q07528 tF(GAA)BtF(GAA)B 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)FtF(GAA)F 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)GtF(GAA)G 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)H1tF(GAA)H1 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)H2tF(GAA)H2 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)MtF(GAA)M 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)P1tF(GAA)P1 73 nt1.53□□□□□ -2.16
ATG20Q07528 tF(GAA)P2tF(GAA)P2 73 nt1.53□□□□□ -2.16
ATG20Q07528 SKI7YOR076C 2244 nt1.5□□□□□ -2.17
ATG20Q07528 YDL159W-AYDL159W-A 132 nt1.5□□□□□ -2.17
ATG20Q07528 FYV8YGR196C 2454 nt1.49□□□□□ -2.17
ATG20Q07528 tQ(UUG)QtQ(UUG)Q 76 nt1.47□□□□□ -2.17
ATG20Q07528 HKR1YDR420W 5409 nt1.47□□□□□ -2.17
ATG20Q07528 SPT7YBR081C 3999 nt1.46□□□□□ -2.18
ATG20Q07528 UTP20YBL004W 7482 nt1.43□□□□□ -2.18
ATG20Q07528 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
ATG20Q07528 YER078W-AYER078W-A 165 nt1.4□□□□□ -2.19
ATG20Q07528 YGR122C-AYGR122C-A 129 nt1.4□□□□□ -2.19
ATG20Q07528 snR75snR75 89 nt1.39□□□□□ -2.19
ATG20Q07528 YER090C-AYER090C-A 90 nt1.39□□□□□ -2.19
ATG20Q07528 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
ATG20Q07528 YOL014WYOL014W 375 nt1.33□□□□□ -2.2
ATG20Q07528 YNL054W-BYNL054W-B 5250 nt1.3□□□□□ -2.2
ATG20Q07528 YPR117WYPR117W 7470 nt1.3□□□□□ -2.2
ATG20Q07528 DOP1YDR141C 5097 nt1.28□□□□□ -2.2
ATG20Q07528 RKR1YMR247C 4689 nt1.28□□□□□ -2.2
ATG20Q07528 YOR192C-BYOR192C-B 5313 nt1.26□□□□□ -2.21
ATG20Q07528 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
ATG20Q07528 VAM6YDL077C 3150 nt1.24□□□□□ -2.21
ATG20Q07528 LTE1YAL024C 4308 nt1.22□□□□□ -2.21
ATG20Q07528 MLP2YIL149C 5040 nt1.22□□□□□ -2.21
ATG20Q07528 snR67snR67 82 nt1.2□□□□□ -2.22
ATG20Q07528 PET111YMR257C 2403 nt1.17□□□□□ -2.22
ATG20Q07528 YMR160WYMR160W 2451 nt1.15□□□□□ -2.22
ATG20Q07528 BUD3YCL014W 4911 nt1.11□□□□□ -2.23
ATG20Q07528 BEM2YER155C 6504 nt1.11□□□□□ -2.23
ATG20Q07528 YKL145W-AYKL145W-A 93 nt1.1□□□□□ -2.23
ATG20Q07528 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
ATG20Q07528 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
ATG20Q07528 YBL100W-BYBL100W-B 5313 nt1.07□□□□□ -2.24
ATG20Q07528 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
ATG20Q07528 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
ATG20Q07528 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
ATG20Q07528 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
ATG20Q07528 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
ATG20Q07528 MLP1YKR095W 5628 nt1.01□□□□□ -2.25
ATG20Q07528 MYO1YHR023W 5787 nt0.99□□□□□ -2.25
ATG20Q07528 YKL106C-AYKL106C-A 120 nt0.97□□□□□ -2.25
ATG20Q07528 YDL114W-AYDL114W-A 114 nt0.93□□□□□ -2.26
ATG20Q07528 IQG1YPL242C 4488 nt0.92□□□□□ -2.26
ATG20Q07528 tT(AGU)BtT(AGU)B 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)CtT(AGU)C 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)DtT(AGU)D 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)HtT(AGU)H 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)I1tT(AGU)I1 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)I2tT(AGU)I2 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)JtT(AGU)J 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)N1tT(AGU)N1 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)N2tT(AGU)N2 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)O1tT(AGU)O1 73 nt0.9□□□□□ -2.27
ATG20Q07528 tT(AGU)O2tT(AGU)O2 73 nt0.9□□□□□ -2.27
ATG20Q07528 tV(UAC)QtV(UAC)Q 76 nt0.86□□□□□ -2.27
ATG20Q07528 YOR186C-AYOR186C-A 210 nt0.86□□□□□ -2.27
ATG20Q07528 FMP27YLR454W 7887 nt0.83□□□□□ -2.28
ATG20Q07528 YML100W-AYML100W-A 174 nt0.82□□□□□ -2.28
ATG20Q07528 YPR159C-AYPR159C-A 102 nt0.78□□□□□ -2.28
ATG20Q07528 THO2YNL139C 4794 nt0.73□□□□□ -2.29
ATG20Q07528 YOR376W-AYOR376W-A 156 nt0.71□□□□□ -2.3
ATG20Q07528 ESP1YGR098C 4893 nt0.65□□□□□ -2.3
ATG20Q07528 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
ATG20Q07528 YOR316C-AYOR316C-A 210 nt0.65□□□□□ -2.31
ATG20Q07528 SOV1YMR066W 2697 nt0.65□□□□□ -2.31
ATG20Q07528 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
ATG20Q07528 snR77snR77 88 nt0.58□□□□□ -2.32
ATG20Q07528 SBH2YER019C-A 267 nt0.55□□□□□ -2.32
ATG20Q07528 snR40snR40 97 nt0.49□□□□□ -2.33
ATG20Q07528 snR128snR128 126 nt0.47□□□□□ -2.33
ATG20Q07528 PAU9YBL108C-A 129 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 30 ms