Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH12P55289 AC010536.3-201ENST00000620306 533 ntBASIC18.54■□□□□ 0.56
CDH12P55289 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDH12P55289 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH12P55289 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH12P55289 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH12P55289 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH12P55289 AP000974.1-201ENST00000623909 2387 ntBASIC18.53■□□□□ 0.56
CDH12P55289 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH12P55289 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDH12P55289 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.53■□□□□ 0.56
CDH12P55289 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH12P55289 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH12P55289 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH12P55289 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH12P55289 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH12P55289 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.52■□□□□ 0.56
CDH12P55289 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH12P55289 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH12P55289 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH12P55289 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH12P55289 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH12P55289 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CDH12P55289 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.52■□□□□ 0.56
CDH12P55289 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH12P55289 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH12P55289 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDH12P55289 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CDH12P55289 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH12P55289 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDH12P55289 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH12P55289 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDH12P55289 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH12P55289 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 AC005332.7-201ENST00000614046 2005 ntBASIC18.51■□□□□ 0.55
CDH12P55289 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.51■□□□□ 0.55
CDH12P55289 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH12P55289 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.51■□□□□ 0.55
CDH12P55289 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDH12P55289 AL591742.1-201ENST00000604433 565 ntBASIC18.51■□□□□ 0.55
CDH12P55289 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH12P55289 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 AC120498.9-201ENST00000339021 3867 ntBASIC18.51■□□□□ 0.55
CDH12P55289 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CDH12P55289 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH12P55289 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDH12P55289 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH12P55289 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH12P55289 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH12P55289 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 KRT18P5-201ENST00000436075 1291 ntBASIC18.5■□□□□ 0.55
CDH12P55289 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH12P55289 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CDH12P55289 AC137761.2-201ENST00000561729 223 ntBASIC18.5■□□□□ 0.55
CDH12P55289 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH12P55289 AC145350.3-201ENST00000569033 163 ntBASIC18.5■□□□□ 0.55
CDH12P55289 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH12P55289 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms