Protein–RNA interactions for Protein: P53075

SHE10, Outer spore wall assembly protein SHE10, yeastyeast

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE10P53075 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)I2tT(AGU)I2 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)JtT(AGU)J 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)N1tT(AGU)N1 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)N2tT(AGU)N2 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)O1tT(AGU)O1 73 nt0.79□□□□□ -2.28
SHE10P53075 tT(AGU)O2tT(AGU)O2 73 nt0.79□□□□□ -2.28
SHE10P53075 YBL071C-BYBL071C-B 99 nt0.79□□□□□ -2.28
SHE10P53075 tF(GAA)BtF(GAA)B 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)FtF(GAA)F 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)GtF(GAA)G 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)H1tF(GAA)H1 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)H2tF(GAA)H2 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)MtF(GAA)M 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)P1tF(GAA)P1 73 nt0.78□□□□□ -2.28
SHE10P53075 tF(GAA)P2tF(GAA)P2 73 nt0.78□□□□□ -2.28
SHE10P53075 YLL066W-BYLL066W-B 171 nt0.78□□□□□ -2.28
SHE10P53075 YLR399W-AYLR399W-A 105 nt0.78□□□□□ -2.28
SHE10P53075 PAU12YGR294W 363 nt0.75□□□□□ -2.29
SHE10P53075 YAL037C-AYAL037C-A 93 nt0.75□□□□□ -2.29
SHE10P53075 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
SHE10P53075 SEC10YLR166C 2616 nt0.73□□□□□ -2.29
SHE10P53075 EST1YLR233C 2100 nt0.73□□□□□ -2.29
SHE10P53075 YMR272W-AYMR272W-A 114 nt0.73□□□□□ -2.29
SHE10P53075 YBR196C-AYBR196C-A 150 nt0.73□□□□□ -2.29
SHE10P53075 RPS26AYGL189C 360 nt0.72□□□□□ -2.29
SHE10P53075 YLL006W-AYLL006W-A 177 nt0.71□□□□□ -2.3
SHE10P53075 CSE1YGL238W 2883 nt0.7□□□□□ -2.3
SHE10P53075 GLG1YKR058W 1851 nt0.7□□□□□ -2.3
SHE10P53075 YLR286W-AYLR286W-A 135 nt0.7□□□□□ -2.3
SHE10P53075 YSP1YHR155W 3687 nt0.69□□□□□ -2.3
SHE10P53075 ULP2YIL031W 3105 nt0.69□□□□□ -2.3
SHE10P53075 NIP1YMR309C 2439 nt0.69□□□□□ -2.3
SHE10P53075 YOL164W-AYOL164W-A 183 nt0.68□□□□□ -2.3
SHE10P53075 snR69snR69 101 nt0.67□□□□□ -2.3
SHE10P53075 tD(GUC)QtD(GUC)Q 75 nt0.67□□□□□ -2.3
SHE10P53075 ORC3YLL004W 1851 nt0.67□□□□□ -2.3
SHE10P53075 LTE1YAL024C 4308 nt0.67□□□□□ -2.3
SHE10P53075 snR62snR62 100 nt0.66□□□□□ -2.3
SHE10P53075 BUL2YML111W 2763 nt0.65□□□□□ -2.3
SHE10P53075 MLP2YIL149C 5040 nt0.64□□□□□ -2.31
SHE10P53075 YDR034C-AYDR034C-A 177 nt0.64□□□□□ -2.31
SHE10P53075 snR47snR47 99 nt0.63□□□□□ -2.31
SHE10P53075 YPL060C-AYPL060C-A 3315 nt0.63□□□□□ -2.31
SHE10P53075 THO2YNL139C 4794 nt0.63□□□□□ -2.31
SHE10P53075 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SHE10P53075 YDR371C-AYDR371C-A 105 nt0.61□□□□□ -2.31
SHE10P53075 YGR240C-AYGR240C-A 201 nt0.61□□□□□ -2.31
SHE10P53075 RPM2YML091C 3609 nt0.61□□□□□ -2.31
SHE10P53075 YDL159C-BYDL159C-B 177 nt0.6□□□□□ -2.31
SHE10P53075 YLR299C-AYLR299C-A 93 nt0.6□□□□□ -2.31
SHE10P53075 FMP27YLR454W 7887 nt0.59□□□□□ -2.31
SHE10P53075 YKL145W-AYKL145W-A 93 nt0.59□□□□□ -2.31
SHE10P53075 YOL014WYOL014W 375 nt0.59□□□□□ -2.31
SHE10P53075 RDS3YPR094W 324 nt0.58□□□□□ -2.32
SHE10P53075 tQ(UUG)QtQ(UUG)Q 76 nt0.56□□□□□ -2.32
SHE10P53075 YML054C-AYML054C-A 159 nt0.56□□□□□ -2.32
SHE10P53075 snR50snR50 90 nt0.55□□□□□ -2.32
SHE10P53075 IQG1YPL242C 4488 nt0.55□□□□□ -2.32
SHE10P53075 PET111YMR257C 2403 nt0.54□□□□□ -2.32
SHE10P53075 YBL100W-CYBL100W-C 120 nt0.54□□□□□ -2.32
SHE10P53075 AI1Q0050 2505 nt0.53□□□□□ -2.33
SHE10P53075 YBR109W-AYBR109W-A 225 nt0.49□□□□□ -2.33
SHE10P53075 YJL077W-AYJL077W-A 87 nt0.48□□□□□ -2.33
SHE10P53075 YHR180C-BYHR180C-B 105 nt0.47□□□□□ -2.33
SHE10P53075 snR38snR38 95 nt0.47□□□□□ -2.33
SHE10P53075 YBL100W-BYBL100W-B 5313 nt0.46□□□□□ -2.34
SHE10P53075 YER090C-AYER090C-A 90 nt0.44□□□□□ -2.34
SHE10P53075 YKL225WYKL225W 348 nt0.44□□□□□ -2.34
SHE10P53075 snR64snR64 101 nt0.41□□□□□ -2.34
SHE10P53075 RPL41AYDL184C 78 nt0.41□□□□□ -2.34
SHE10P53075 YDL159W-AYDL159W-A 132 nt0.37□□□□□ -2.35
SHE10P53075 YBR296C-AYBR296C-A 120 nt0.37□□□□□ -2.35
SHE10P53075 snR67snR67 82 nt0.32□□□□□ -2.36
SHE10P53075 snR53snR53 91 nt0.32□□□□□ -2.36
SHE10P53075 ESP1YGR098C 4893 nt0.31□□□□□ -2.36
SHE10P53075 SOV1YMR066W 2697 nt0.31□□□□□ -2.36
SHE10P53075 SKI7YOR076C 2244 nt0.29□□□□□ -2.36
SHE10P53075 MLP1YKR095W 5628 nt0.26□□□□□ -2.37
SHE10P53075 YER078W-AYER078W-A 165 nt0.25□□□□□ -2.37
SHE10P53075 YOR186C-AYOR186C-A 210 nt0.24□□□□□ -2.37
SHE10P53075 YML100W-AYML100W-A 174 nt0.23□□□□□ -2.37
SHE10P53075 YGR122C-AYGR122C-A 129 nt0.22□□□□□ -2.37
SHE10P53075 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
SHE10P53075 snR128snR128 126 nt0.17□□□□□ -2.38
SHE10P53075 YLR149C-AYLR149C-A 87 nt0.15□□□□□ -2.39
SHE10P53075 YKL106C-AYKL106C-A 120 nt0.13□□□□□ -2.39
SHE10P53075 PAU9YBL108C-A 129 nt0.12□□□□□ -2.39
SHE10P53075 YOR376W-AYOR376W-A 156 nt0.12□□□□□ -2.39
SHE10P53075 YDL114W-AYDL114W-A 114 nt0□□□□□ -2.41
SHE10P53075 tA(UGC)QtA(UGC)Q 76 nt-0.01□□□□□ -2.41
SHE10P53075 tV(UAC)QtV(UAC)Q 76 nt-0.01□□□□□ -2.41
SHE10P53075 YOR316C-AYOR316C-A 210 nt-0.06□□□□□ -2.42
SHE10P53075 YKL096C-BYKL096C-B 150 nt-0.07□□□□□ -2.42
SHE10P53075 snR77snR77 88 nt-0.09□□□□□ -2.42
SHE10P53075 YJL113WYJL113W 4647 nt-0.09□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms