Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.04■□□□□ 0.8
CCNFP41002 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.04■□□□□ 0.8
CCNFP41002 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.04■□□□□ 0.8
CCNFP41002 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCNFP41002 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCNFP41002 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 AC005181.1-201ENST00000604782 1256 ntBASIC20.03■□□□□ 0.8
CCNFP41002 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.03■□□□□ 0.8
CCNFP41002 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.03■□□□□ 0.8
CCNFP41002 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCNFP41002 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCNFP41002 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNFP41002 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCNFP41002 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNFP41002 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.02■□□□□ 0.8
CCNFP41002 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCNFP41002 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNFP41002 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.02■□□□□ 0.8
CCNFP41002 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.02■□□□□ 0.8
CCNFP41002 CYP2T1P-201ENST00000432607 1285 ntBASIC20.02■□□□□ 0.8
CCNFP41002 RARRES2P4-201ENST00000514074 484 ntBASIC20.02■□□□□ 0.8
CCNFP41002 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.02■□□□□ 0.8
CCNFP41002 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.02■□□□□ 0.8
CCNFP41002 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCNFP41002 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCNFP41002 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCNFP41002 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCNFP41002 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.02■□□□□ 0.79
CCNFP41002 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNFP41002 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
CCNFP41002 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNFP41002 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCNFP41002 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNFP41002 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNFP41002 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.01■□□□□ 0.79
CCNFP41002 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCNFP41002 RAP2CP1-201ENST00000605103 478 ntBASIC20.01■□□□□ 0.79
CCNFP41002 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 OR10C1-204ENST00000622521 1039 ntBASIC20.01■□□□□ 0.79
CCNFP41002 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCNFP41002 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.01■□□□□ 0.79
CCNFP41002 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNFP41002 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
CCNFP41002 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.01■□□□□ 0.79
CCNFP41002 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20■□□□□ 0.79
CCNFP41002 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20■□□□□ 0.79
CCNFP41002 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20■□□□□ 0.79
CCNFP41002 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20■□□□□ 0.79
CCNFP41002 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20■□□□□ 0.79
CCNFP41002 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20■□□□□ 0.79
CCNFP41002 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 AC016405.3-201ENST00000607710 860 ntBASIC20■□□□□ 0.79
CCNFP41002 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20■□□□□ 0.79
CCNFP41002 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20■□□□□ 0.79
CCNFP41002 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20■□□□□ 0.79
CCNFP41002 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20■□□□□ 0.79
CCNFP41002 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20■□□□□ 0.79
CCNFP41002 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCNFP41002 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCNFP41002 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20■□□□□ 0.79
CCNFP41002 AC093484.2-201ENST00000580996 2166 ntBASIC20■□□□□ 0.79
CCNFP41002 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCNFP41002 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CCNFP41002 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms