Protein–RNA interactions for Protein: P40353

ATF1, Alcohol O-acetyltransferase 1, yeastyeast

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATF1P40353 CDC25YLR310C 4770 nt1.2□□□□□ -2.22
ATF1P40353 ULP2YIL031W 3105 nt1.2□□□□□ -2.22
ATF1P40353 CAT8YMR280C 4302 nt1.2□□□□□ -2.22
ATF1P40353 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
ATF1P40353 SKI7YOR076C 2244 nt1.19□□□□□ -2.22
ATF1P40353 YLR399W-AYLR399W-A 105 nt1.19□□□□□ -2.22
ATF1P40353 YPL060C-AYPL060C-A 3315 nt1.19□□□□□ -2.22
ATF1P40353 CDC39YCR093W 6327 nt1.19□□□□□ -2.22
ATF1P40353 YNL054W-BYNL054W-B 5250 nt1.18□□□□□ -2.22
ATF1P40353 RDS3YPR094W 324 nt1.18□□□□□ -2.22
ATF1P40353 YSP1YHR155W 3687 nt1.18□□□□□ -2.22
ATF1P40353 YBR296C-AYBR296C-A 120 nt1.17□□□□□ -2.22
ATF1P40353 YGR122C-AYGR122C-A 129 nt1.16□□□□□ -2.22
ATF1P40353 HUG1YML058W-A 207 nt1.16□□□□□ -2.22
ATF1P40353 NIP1YMR309C 2439 nt1.16□□□□□ -2.22
ATF1P40353 LAA1YJL207C 6045 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)E1tH(GUG)E1 72 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)E2tH(GUG)E2 72 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)G1tH(GUG)G1 72 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)G2tH(GUG)G2 72 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)HtH(GUG)H 72 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)KtH(GUG)K 72 nt1.14□□□□□ -2.23
ATF1P40353 tH(GUG)MtH(GUG)M 72 nt1.14□□□□□ -2.23
ATF1P40353 PAU12YGR294W 363 nt1.13□□□□□ -2.23
ATF1P40353 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
ATF1P40353 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
ATF1P40353 YLL006W-AYLL006W-A 177 nt1.11□□□□□ -2.23
ATF1P40353 NUP192YJL039C 5052 nt1.09□□□□□ -2.23
ATF1P40353 tQ(UUG)QtQ(UUG)Q 76 nt1.09□□□□□ -2.23
ATF1P40353 BUL2YML111W 2763 nt1.09□□□□□ -2.24
ATF1P40353 SIP4YJL089W 2490 nt1.07□□□□□ -2.24
ATF1P40353 YJL077W-AYJL077W-A 87 nt1.04□□□□□ -2.24
ATF1P40353 PET111YMR257C 2403 nt1.03□□□□□ -2.24
ATF1P40353 SPT7YBR081C 3999 nt1.03□□□□□ -2.25
ATF1P40353 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
ATF1P40353 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
ATF1P40353 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
ATF1P40353 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
ATF1P40353 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
ATF1P40353 YGR130CYGR130C 2451 nt1□□□□□ -2.25
ATF1P40353 VAM6YDL077C 3150 nt1□□□□□ -2.25
ATF1P40353 YOR192C-BYOR192C-B 5313 nt1□□□□□ -2.25
ATF1P40353 RKR1YMR247C 4689 nt0.99□□□□□ -2.25
ATF1P40353 YER090C-AYER090C-A 90 nt0.99□□□□□ -2.25
ATF1P40353 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
ATF1P40353 BEM2YER155C 6504 nt0.93□□□□□ -2.26
ATF1P40353 tV(UAC)BtV(UAC)B 74 nt0.9□□□□□ -2.27
ATF1P40353 tV(UAC)DtV(UAC)D 74 nt0.9□□□□□ -2.27
ATF1P40353 snR67snR67 82 nt0.85□□□□□ -2.27
ATF1P40353 YPR117WYPR117W 7470 nt0.84□□□□□ -2.27
ATF1P40353 IML1YJR138W 4755 nt0.82□□□□□ -2.28
ATF1P40353 MLP2YIL149C 5040 nt0.81□□□□□ -2.28
ATF1P40353 YMR160WYMR160W 2451 nt0.79□□□□□ -2.28
ATF1P40353 YDL114W-AYDL114W-A 114 nt0.79□□□□□ -2.28
ATF1P40353 DOP1YDR141C 5097 nt0.79□□□□□ -2.28
ATF1P40353 tV(UAC)QtV(UAC)Q 76 nt0.77□□□□□ -2.29
ATF1P40353 YKL106C-AYKL106C-A 120 nt0.77□□□□□ -2.29
ATF1P40353 PAU24YBR301W 363 nt0.77□□□□□ -2.29
ATF1P40353 LTE1YAL024C 4308 nt0.74□□□□□ -2.29
ATF1P40353 YOR376W-AYOR376W-A 156 nt0.74□□□□□ -2.29
ATF1P40353 YBL100W-BYBL100W-B 5313 nt0.73□□□□□ -2.29
ATF1P40353 THO2YNL139C 4794 nt0.73□□□□□ -2.29
ATF1P40353 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
ATF1P40353 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
ATF1P40353 snR40snR40 97 nt0.62□□□□□ -2.31
ATF1P40353 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
ATF1P40353 IQG1YPL242C 4488 nt0.58□□□□□ -2.32
ATF1P40353 tT(AGU)BtT(AGU)B 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)CtT(AGU)C 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)DtT(AGU)D 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)HtT(AGU)H 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)I1tT(AGU)I1 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)I2tT(AGU)I2 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)JtT(AGU)J 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)N1tT(AGU)N1 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)N2tT(AGU)N2 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)O1tT(AGU)O1 73 nt0.57□□□□□ -2.32
ATF1P40353 tT(AGU)O2tT(AGU)O2 73 nt0.57□□□□□ -2.32
ATF1P40353 YML100W-AYML100W-A 174 nt0.56□□□□□ -2.32
ATF1P40353 snR77snR77 88 nt0.54□□□□□ -2.32
ATF1P40353 YOR316C-AYOR316C-A 210 nt0.52□□□□□ -2.33
ATF1P40353 MLP1YKR095W 5628 nt0.51□□□□□ -2.33
ATF1P40353 SOV1YMR066W 2697 nt0.48□□□□□ -2.33
ATF1P40353 YOR186C-AYOR186C-A 210 nt0.47□□□□□ -2.33
ATF1P40353 SBH2YER019C-A 267 nt0.45□□□□□ -2.34
ATF1P40353 UTP20YBL004W 7482 nt0.43□□□□□ -2.34
ATF1P40353 ESP1YGR098C 4893 nt0.43□□□□□ -2.34
ATF1P40353 FMP27YLR454W 7887 nt0.42□□□□□ -2.34
ATF1P40353 PAU9YBL108C-A 129 nt0.4□□□□□ -2.35
ATF1P40353 YKL145W-AYKL145W-A 93 nt0.36□□□□□ -2.35
ATF1P40353 snR128snR128 126 nt0.34□□□□□ -2.36
ATF1P40353 tF(GAA)BtF(GAA)B 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)FtF(GAA)F 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)GtF(GAA)G 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)H1tF(GAA)H1 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)H2tF(GAA)H2 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)MtF(GAA)M 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)P1tF(GAA)P1 73 nt0.33□□□□□ -2.36
ATF1P40353 tF(GAA)P2tF(GAA)P2 73 nt0.33□□□□□ -2.36
ATF1P40353 YOL013W-AYOL013W-A 192 nt0.25□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms