Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 snR60snR60 104 nt-4.16□□□□□ -3.08
VMR1P38735 YNL324WYNL324W 396 nt-4.17□□□□□ -3.08
VMR1P38735 ATP6Q0085 780 nt-4.19□□□□□ -3.08
VMR1P38735 YNL028WYNL028W 318 nt-4.19□□□□□ -3.08
VMR1P38735 YHR180C-BYHR180C-B 105 nt-4.19□□□□□ -3.08
VMR1P38735 YER006C-AYER006C-A 318 nt-4.2□□□□□ -3.08
VMR1P38735 YAL016C-BYAL016C-B 186 nt-4.21□□□□□ -3.08
VMR1P38735 YER181CYER181C 324 nt-4.24□□□□□ -3.09
VMR1P38735 YMR001C-AYMR001C-A 231 nt-4.27□□□□□ -3.09
VMR1P38735 YLR299C-AYLR299C-A 93 nt-4.28□□□□□ -3.09
VMR1P38735 YLR412C-AYLR412C-A 207 nt-4.28□□□□□ -3.09
VMR1P38735 snR6snR6 112 nt-4.3□□□□□ -3.1
VMR1P38735 YPR012WYPR012W 255 nt-4.32□□□□□ -3.1
VMR1P38735 snR78snR78 87 nt-4.35□□□□□ -3.11
VMR1P38735 YGL041CYGL041C 204 nt-4.36□□□□□ -3.11
VMR1P38735 YOR329W-AYOR329W-A 210 nt-4.39□□□□□ -3.11
VMR1P38735 YLR120W-AYLR120W-A 102 nt-4.4□□□□□ -3.11
VMR1P38735 YAL066WYAL066W 309 nt-4.42□□□□□ -3.12
VMR1P38735 YLR434CYLR434C 384 nt-4.44□□□□□ -3.12
VMR1P38735 YKL106C-AYKL106C-A 120 nt-4.45□□□□□ -3.12
VMR1P38735 YOL155W-AYOL155W-A 135 nt-4.48□□□□□ -3.13
VMR1P38735 YEL014CYEL014C 306 nt-4.49□□□□□ -3.13
VMR1P38735 YDR524C-AYDR524C-A 120 nt-4.53□□□□□ -3.14
VMR1P38735 STE18YJR086W 333 nt-4.56□□□□□ -3.14
VMR1P38735 HTL1YCR020W-B 237 nt-4.57□□□□□ -3.14
VMR1P38735 snR80snR80 171 nt-4.57□□□□□ -3.14
VMR1P38735 tW(UCA)QtW(UCA)Q 74 nt-4.57□□□□□ -3.14
VMR1P38735 snR73snR73 106 nt-4.59□□□□□ -3.14
VMR1P38735 YLR222C-AYLR222C-A 231 nt-4.61□□□□□ -3.15
VMR1P38735 YOR102WYOR102W 351 nt-4.7□□□□□ -3.16
VMR1P38735 YOL038C-AYOL038C-A 96 nt-4.71□□□□□ -3.16
VMR1P38735 YOR335W-AYOR335W-A 81 nt-4.72□□□□□ -3.16
VMR1P38735 YDR413CYDR413C 576 nt-4.74□□□□□ -3.17
VMR1P38735 BIL1YOR304C-A 231 nt-4.74□□□□□ -3.17
VMR1P38735 RPL41BYDL133C-A 78 nt-4.76□□□□□ -3.17
VMR1P38735 YJL150WYJL150W 303 nt-4.77□□□□□ -3.17
VMR1P38735 YNL198CYNL198C 303 nt-4.78□□□□□ -3.18
VMR1P38735 YJL047C-AYJL047C-A 135 nt-4.82□□□□□ -3.18
VMR1P38735 YBR109W-AYBR109W-A 225 nt-4.85□□□□□ -3.19
VMR1P38735 YNL122CYNL122C 348 nt-4.92□□□□□ -3.2
VMR1P38735 snR48snR48 113 nt-4.95□□□□□ -3.2
VMR1P38735 YBR131C-AYBR131C-A 90 nt-4.95□□□□□ -3.2
VMR1P38735 YGL188C-AYGL188C-A 141 nt-4.97□□□□□ -3.21
VMR1P38735 YKL118WYKL118W 312 nt-4.98□□□□□ -3.21
VMR1P38735 tF(GAA)QtF(GAA)Q 75 nt-5.03□□□□□ -3.21
VMR1P38735 YKL123WYKL123W 381 nt-5.04□□□□□ -3.22
VMR1P38735 Q0255Q0255 1419 nt-5.06□□□□□ -3.22
VMR1P38735 RPL41AYDL184C 78 nt-5.07□□□□□ -3.22
VMR1P38735 YBR296C-AYBR296C-A 120 nt-5.08□□□□□ -3.22
VMR1P38735 YDR183C-AYDR183C-A 258 nt-5.09□□□□□ -3.22
VMR1P38735 YAL063C-AYAL063C-A 291 nt-5.16□□□□□ -3.23
VMR1P38735 tL(UAA)QtL(UAA)Q 85 nt-5.18□□□□□ -3.24
VMR1P38735 snR56snR56 88 nt-5.19□□□□□ -3.24
VMR1P38735 snR38snR38 95 nt-5.2□□□□□ -3.24
VMR1P38735 YNL097C-BYNL097C-B 123 nt-5.21□□□□□ -3.24
VMR1P38735 snR87snR87 109 nt-5.23□□□□□ -3.25
VMR1P38735 YGR035CYGR035C 351 nt-5.25□□□□□ -3.25
VMR1P38735 YDR406W-AYDR406W-A 246 nt-5.26□□□□□ -3.25
VMR1P38735 GIM4YEL003W 336 nt-5.26□□□□□ -3.25
VMR1P38735 YPL038W-AYPL038W-A 192 nt-5.3□□□□□ -3.26
VMR1P38735 YLR285C-AYLR285C-A 171 nt-5.44□□□□□ -3.28
VMR1P38735 snR85snR85 171 nt-5.49□□□□□ -3.29
VMR1P38735 tV(UAC)QtV(UAC)Q 76 nt-5.5□□□□□ -3.29
VMR1P38735 YDL114W-AYDL114W-A 114 nt-5.67□□□□□ -3.32
VMR1P38735 RPL39YJL189W 156 nt-5.67□□□□□ -3.32
VMR1P38735 YHL015W-AYHL015W-A 84 nt-5.72□□□□□ -3.32
VMR1P38735 snR52snR52 92 nt-5.8□□□□□ -3.34
VMR1P38735 SOM1YEL059C-A 225 nt-5.81□□□□□ -3.34
VMR1P38735 YOL164W-AYOL164W-A 183 nt-5.81□□□□□ -3.34
VMR1P38735 YNR025CYNR025C 360 nt-5.82□□□□□ -3.34
VMR1P38735 YOR302WYOR302W 78 nt-5.82□□□□□ -3.34
VMR1P38735 YCR095W-AYCR095W-A 159 nt-5.85□□□□□ -3.35
VMR1P38735 YNL277W-AYNL277W-A 189 nt-5.87□□□□□ -3.35
VMR1P38735 YBL071C-BYBL071C-B 99 nt-5.88□□□□□ -3.35
VMR1P38735 snR58snR58 96 nt-5.93□□□□□ -3.36
VMR1P38735 YJL136W-AYJL136W-A 84 nt-5.93□□□□□ -3.36
VMR1P38735 snR47snR47 99 nt-5.95□□□□□ -3.36
VMR1P38735 YDR157WYDR157W 402 nt-6.01□□□□□ -3.37
VMR1P38735 YGR151CYGR151C 336 nt-6.04□□□□□ -3.38
VMR1P38735 YDR118W-AYDR118W-A 117 nt-6.1□□□□□ -3.39
VMR1P38735 YKL096C-BYKL096C-B 150 nt-6.15□□□□□ -3.39
VMR1P38735 YKL225WYKL225W 348 nt-6.18□□□□□ -3.4
VMR1P38735 YBL053WYBL053W 375 nt-6.19□□□□□ -3.4
VMR1P38735 SPG3YDR504C 384 nt-6.27□□□□□ -3.41
VMR1P38735 YHR175W-AYHR175W-A 150 nt-6.27□□□□□ -3.41
VMR1P38735 YAL037C-AYAL037C-A 93 nt-6.32□□□□□ -3.42
VMR1P38735 YBL100W-CYBL100W-C 120 nt-6.33□□□□□ -3.42
VMR1P38735 YDL240C-AYDL240C-A 138 nt-6.35□□□□□ -3.43
VMR1P38735 YDL159W-AYDL159W-A 132 nt-6.49□□□□□ -3.45
VMR1P38735 tS(GCU)Q1tS(GCU)Q1 86 nt-6.5□□□□□ -3.45
VMR1P38735 YPL152W-AYPL152W-A 99 nt-6.62□□□□□ -3.47
VMR1P38735 YEL050W-AYEL050W-A 192 nt-6.64□□□□□ -3.47
VMR1P38735 YGR122C-AYGR122C-A 129 nt-6.69□□□□□ -3.48
VMR1P38735 YDR034C-AYDR034C-A 177 nt-6.75□□□□□ -3.49
VMR1P38735 tR(UCU)Q1tR(UCU)Q1 73 nt-6.76□□□□□ -3.49
VMR1P38735 YNL170WYNL170W 396 nt-6.88□□□□□ -3.51
VMR1P38735 snR65snR65 100 nt-6.89□□□□□ -3.51
VMR1P38735 tC(GCA)QtC(GCA)Q 76 nt-7.07□□□□□ -3.54
VMR1P38735 YGL007C-AYGL007C-A 87 nt-7.12□□□□□ -3.55
VMR1P38735 YCL001W-BYCL001W-B 255 nt-7.26□□□□□ -3.57
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms