Protein–RNA interactions for Protein: P38328

ARC40, Actin-related protein 2/3 complex subunit 1, yeastyeast

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ARC40P38328 SEC10YLR166C 2616 nt0.87□□□□□ -2.27
ARC40P38328 ULP2YIL031W 3105 nt0.86□□□□□ -2.27
ARC40P38328 YNL054W-BYNL054W-B 5250 nt0.86□□□□□ -2.27
ARC40P38328 RPM2YML091C 3609 nt0.85□□□□□ -2.27
ARC40P38328 YLR286W-AYLR286W-A 135 nt0.84□□□□□ -2.27
ARC40P38328 YOL164W-AYOL164W-A 183 nt0.84□□□□□ -2.27
ARC40P38328 EST1YLR233C 2100 nt0.83□□□□□ -2.28
ARC40P38328 YLL006W-AYLL006W-A 177 nt0.83□□□□□ -2.28
ARC40P38328 YOR192C-BYOR192C-B 5313 nt0.82□□□□□ -2.28
ARC40P38328 YDR034C-AYDR034C-A 177 nt0.82□□□□□ -2.28
ARC40P38328 ORC3YLL004W 1851 nt0.81□□□□□ -2.28
ARC40P38328 SCC2YDR180W 4482 nt0.81□□□□□ -2.28
ARC40P38328 CSE1YGL238W 2883 nt0.79□□□□□ -2.28
ARC40P38328 tD(GUC)QtD(GUC)Q 75 nt0.79□□□□□ -2.28
ARC40P38328 snR69snR69 101 nt0.78□□□□□ -2.28
ARC40P38328 YGR240C-AYGR240C-A 201 nt0.78□□□□□ -2.28
ARC40P38328 snR47snR47 99 nt0.78□□□□□ -2.28
ARC40P38328 HUG1YML058W-A 207 nt0.77□□□□□ -2.29
ARC40P38328 NIP1YMR309C 2439 nt0.77□□□□□ -2.29
ARC40P38328 YPR117WYPR117W 7470 nt0.76□□□□□ -2.29
ARC40P38328 PAU24YBR301W 363 nt0.76□□□□□ -2.29
ARC40P38328 YPL060C-AYPL060C-A 3315 nt0.75□□□□□ -2.29
ARC40P38328 YLR299C-AYLR299C-A 93 nt0.73□□□□□ -2.29
ARC40P38328 DOP1YDR141C 5097 nt0.73□□□□□ -2.29
ARC40P38328 BUL2YML111W 2763 nt0.73□□□□□ -2.29
ARC40P38328 YDL159C-BYDL159C-B 177 nt0.72□□□□□ -2.29
ARC40P38328 YBL100W-CYBL100W-C 120 nt0.72□□□□□ -2.29
ARC40P38328 PAU12YGR294W 363 nt0.71□□□□□ -2.3
ARC40P38328 RDS3YPR094W 324 nt0.69□□□□□ -2.3
ARC40P38328 YDR371C-AYDR371C-A 105 nt0.67□□□□□ -2.3
ARC40P38328 YML054C-AYML054C-A 159 nt0.67□□□□□ -2.3
ARC40P38328 PET111YMR257C 2403 nt0.67□□□□□ -2.3
ARC40P38328 LTE1YAL024C 4308 nt0.67□□□□□ -2.3
ARC40P38328 tQ(UUG)QtQ(UUG)Q 76 nt0.65□□□□□ -2.31
ARC40P38328 YJL077W-AYJL077W-A 87 nt0.63□□□□□ -2.31
ARC40P38328 YBR109W-AYBR109W-A 225 nt0.63□□□□□ -2.31
ARC40P38328 snR50snR50 90 nt0.63□□□□□ -2.31
ARC40P38328 MLP2YIL149C 5040 nt0.61□□□□□ -2.31
ARC40P38328 snR38snR38 95 nt0.6□□□□□ -2.31
ARC40P38328 snR64snR64 101 nt0.59□□□□□ -2.31
ARC40P38328 YHR180C-BYHR180C-B 105 nt0.59□□□□□ -2.31
ARC40P38328 YKL225WYKL225W 348 nt0.59□□□□□ -2.31
ARC40P38328 YPR159C-AYPR159C-A 102 nt0.59□□□□□ -2.31
ARC40P38328 tT(AGU)BtT(AGU)B 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)CtT(AGU)C 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)DtT(AGU)D 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)HtT(AGU)H 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)I1tT(AGU)I1 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)I2tT(AGU)I2 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)JtT(AGU)J 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)N1tT(AGU)N1 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)N2tT(AGU)N2 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)O1tT(AGU)O1 73 nt0.58□□□□□ -2.32
ARC40P38328 tT(AGU)O2tT(AGU)O2 73 nt0.58□□□□□ -2.32
ARC40P38328 YMR272W-AYMR272W-A 114 nt0.57□□□□□ -2.32
ARC40P38328 THO2YNL139C 4794 nt0.57□□□□□ -2.32
ARC40P38328 YMR160WYMR160W 2451 nt0.55□□□□□ -2.32
ARC40P38328 YER090C-AYER090C-A 90 nt0.55□□□□□ -2.32
ARC40P38328 RPL41AYDL184C 78 nt0.54□□□□□ -2.32
ARC40P38328 snR53snR53 91 nt0.54□□□□□ -2.32
ARC40P38328 AI1Q0050 2505 nt0.54□□□□□ -2.32
ARC40P38328 YBL100W-BYBL100W-B 5313 nt0.52□□□□□ -2.33
ARC40P38328 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
ARC40P38328 IQG1YPL242C 4488 nt0.52□□□□□ -2.33
ARC40P38328 UTP20YBL004W 7482 nt0.51□□□□□ -2.33
ARC40P38328 YDL159W-AYDL159W-A 132 nt0.51□□□□□ -2.33
ARC40P38328 YBR296C-AYBR296C-A 120 nt0.51□□□□□ -2.33
ARC40P38328 MLP1YKR095W 5628 nt0.48□□□□□ -2.33
ARC40P38328 snR67snR67 82 nt0.41□□□□□ -2.34
ARC40P38328 YOR186C-AYOR186C-A 210 nt0.41□□□□□ -2.34
ARC40P38328 tF(GAA)BtF(GAA)B 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)FtF(GAA)F 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)GtF(GAA)G 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)H1tF(GAA)H1 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)H2tF(GAA)H2 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)MtF(GAA)M 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)P1tF(GAA)P1 73 nt0.4□□□□□ -2.35
ARC40P38328 tF(GAA)P2tF(GAA)P2 73 nt0.4□□□□□ -2.35
ARC40P38328 SKI7YOR076C 2244 nt0.39□□□□□ -2.35
ARC40P38328 FMP27YLR454W 7887 nt0.35□□□□□ -2.35
ARC40P38328 YGR122C-AYGR122C-A 129 nt0.35□□□□□ -2.35
ARC40P38328 YKL145W-AYKL145W-A 93 nt0.35□□□□□ -2.35
ARC40P38328 YLR149C-AYLR149C-A 87 nt0.34□□□□□ -2.36
ARC40P38328 SOV1YMR066W 2697 nt0.33□□□□□ -2.36
ARC40P38328 YML100W-AYML100W-A 174 nt0.3□□□□□ -2.36
ARC40P38328 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
ARC40P38328 YOL014WYOL014W 375 nt0.26□□□□□ -2.37
ARC40P38328 YKL106C-AYKL106C-A 120 nt0.23□□□□□ -2.37
ARC40P38328 YOL013W-AYOL013W-A 192 nt0.23□□□□□ -2.37
ARC40P38328 snR128snR128 126 nt0.2□□□□□ -2.38
ARC40P38328 YOR376W-AYOR376W-A 156 nt0.19□□□□□ -2.38
ARC40P38328 PAU9YBL108C-A 129 nt0.15□□□□□ -2.39
ARC40P38328 YKL096C-BYKL096C-B 150 nt0.14□□□□□ -2.39
ARC40P38328 YDL114W-AYDL114W-A 114 nt0.13□□□□□ -2.39
ARC40P38328 tV(UAC)QtV(UAC)Q 76 nt0.11□□□□□ -2.39
ARC40P38328 YER078W-AYER078W-A 165 nt0.07□□□□□ -2.4
ARC40P38328 YOR316C-AYOR316C-A 210 nt0.04□□□□□ -2.4
ARC40P38328 tA(UGC)QtA(UGC)Q 76 nt0.02□□□□□ -2.41
ARC40P38328 snR77snR77 88 nt0.01□□□□□ -2.41
ARC40P38328 snR75snR75 89 nt0□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms