Protein–RNA interactions for Protein: P32319

PEP1, Vacuolar protein sorting/targeting protein VPS10, yeastyeast

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP1P32319 snR41snR41 95 nt-5.03□□□□□ -3.21
PEP1P32319 YOL038C-AYOL038C-A 96 nt-5.05□□□□□ -3.22
PEP1P32319 YPR012WYPR012W 255 nt-5.07□□□□□ -3.22
PEP1P32319 YHR180C-BYHR180C-B 105 nt-5.08□□□□□ -3.22
PEP1P32319 YOL013W-BYOL013W-B 291 nt-5.1□□□□□ -3.23
PEP1P32319 ATP6Q0085 780 nt-5.12□□□□□ -3.23
PEP1P32319 snR73snR73 106 nt-5.2□□□□□ -3.24
PEP1P32319 YLR299C-AYLR299C-A 93 nt-5.2□□□□□ -3.24
PEP1P32319 YOR381W-AYOR381W-A 168 nt-5.2□□□□□ -3.24
PEP1P32319 YNL198CYNL198C 303 nt-5.21□□□□□ -3.24
PEP1P32319 YKL106C-AYKL106C-A 120 nt-5.25□□□□□ -3.25
PEP1P32319 YJL150WYJL150W 303 nt-5.25□□□□□ -3.25
PEP1P32319 YAL016C-BYAL016C-B 186 nt-5.31□□□□□ -3.26
PEP1P32319 snR80snR80 171 nt-5.32□□□□□ -3.26
PEP1P32319 snR34snR34 203 nt-5.32□□□□□ -3.26
PEP1P32319 YOR335W-AYOR335W-A 81 nt-5.36□□□□□ -3.27
PEP1P32319 snR60snR60 104 nt-5.37□□□□□ -3.27
PEP1P32319 snR78snR78 87 nt-5.37□□□□□ -3.27
PEP1P32319 YNL324WYNL324W 396 nt-5.44□□□□□ -3.28
PEP1P32319 YOR329W-AYOR329W-A 210 nt-5.46□□□□□ -3.28
PEP1P32319 YNL028WYNL028W 318 nt-5.47□□□□□ -3.29
PEP1P32319 RPL41BYDL133C-A 78 nt-5.48□□□□□ -3.29
PEP1P32319 YGL041CYGL041C 204 nt-5.5□□□□□ -3.29
PEP1P32319 snR54snR54 86 nt-5.55□□□□□ -3.3
PEP1P32319 YDR413CYDR413C 576 nt-5.56□□□□□ -3.3
PEP1P32319 YMR001C-AYMR001C-A 231 nt-5.59□□□□□ -3.3
PEP1P32319 YLR120W-AYLR120W-A 102 nt-5.63□□□□□ -3.31
PEP1P32319 BIL1YOR304C-A 231 nt-5.63□□□□□ -3.31
PEP1P32319 YEL014CYEL014C 306 nt-5.65□□□□□ -3.31
PEP1P32319 YLR222C-AYLR222C-A 231 nt-5.67□□□□□ -3.32
PEP1P32319 YBR109W-AYBR109W-A 225 nt-5.75□□□□□ -3.33
PEP1P32319 YLR434CYLR434C 384 nt-5.76□□□□□ -3.33
PEP1P32319 YER006C-AYER006C-A 318 nt-5.76□□□□□ -3.33
PEP1P32319 snR87snR87 109 nt-5.79□□□□□ -3.34
PEP1P32319 Q0255Q0255 1419 nt-5.82□□□□□ -3.34
PEP1P32319 YOR102WYOR102W 351 nt-5.86□□□□□ -3.35
PEP1P32319 HTL1YCR020W-B 237 nt-5.91□□□□□ -3.36
PEP1P32319 tW(UCA)QtW(UCA)Q 74 nt-5.95□□□□□ -3.36
PEP1P32319 YGR035CYGR035C 351 nt-6.07□□□□□ -3.38
PEP1P32319 YBR296C-AYBR296C-A 120 nt-6.11□□□□□ -3.39
PEP1P32319 snR48snR48 113 nt-6.14□□□□□ -3.39
PEP1P32319 YGL188C-AYGL188C-A 141 nt-6.15□□□□□ -3.39
PEP1P32319 RPL41AYDL184C 78 nt-6.18□□□□□ -3.4
PEP1P32319 YLR412C-AYLR412C-A 207 nt-6.19□□□□□ -3.4
PEP1P32319 YDR406W-AYDR406W-A 246 nt-6.23□□□□□ -3.41
PEP1P32319 YKL118WYKL118W 312 nt-6.23□□□□□ -3.41
PEP1P32319 YNL097C-BYNL097C-B 123 nt-6.27□□□□□ -3.41
PEP1P32319 snR38snR38 95 nt-6.27□□□□□ -3.41
PEP1P32319 YBR131C-AYBR131C-A 90 nt-6.28□□□□□ -3.42
PEP1P32319 YAL066WYAL066W 309 nt-6.29□□□□□ -3.42
PEP1P32319 tL(UAA)QtL(UAA)Q 85 nt-6.35□□□□□ -3.43
PEP1P32319 snR56snR56 88 nt-6.39□□□□□ -3.43
PEP1P32319 GIM4YEL003W 336 nt-6.4□□□□□ -3.43
PEP1P32319 tF(GAA)QtF(GAA)Q 75 nt-6.44□□□□□ -3.44
PEP1P32319 YJL136W-AYJL136W-A 84 nt-6.45□□□□□ -3.44
PEP1P32319 snR85snR85 171 nt-6.46□□□□□ -3.44
PEP1P32319 tV(UAC)QtV(UAC)Q 76 nt-6.55□□□□□ -3.46
PEP1P32319 YNL122CYNL122C 348 nt-6.58□□□□□ -3.46
PEP1P32319 YPL038W-AYPL038W-A 192 nt-6.64□□□□□ -3.47
PEP1P32319 YDR183C-AYDR183C-A 258 nt-6.67□□□□□ -3.48
PEP1P32319 YAL063C-AYAL063C-A 291 nt-6.68□□□□□ -3.48
PEP1P32319 YDL114W-AYDL114W-A 114 nt-6.73□□□□□ -3.49
PEP1P32319 YCR095W-AYCR095W-A 159 nt-6.77□□□□□ -3.49
PEP1P32319 RPL39YJL189W 156 nt-6.78□□□□□ -3.49
PEP1P32319 YJL047C-AYJL047C-A 135 nt-6.81□□□□□ -3.5
PEP1P32319 snR58snR58 96 nt-6.91□□□□□ -3.51
PEP1P32319 YDR157WYDR157W 402 nt-6.92□□□□□ -3.52
PEP1P32319 YKL123WYKL123W 381 nt-6.95□□□□□ -3.52
PEP1P32319 YBL100W-CYBL100W-C 120 nt-6.99□□□□□ -3.53
PEP1P32319 YDR118W-AYDR118W-A 117 nt-7□□□□□ -3.53
PEP1P32319 YHL015W-AYHL015W-A 84 nt-7□□□□□ -3.53
PEP1P32319 YOL164W-AYOL164W-A 183 nt-7.11□□□□□ -3.55
PEP1P32319 YKL096C-BYKL096C-B 150 nt-7.14□□□□□ -3.55
PEP1P32319 SOM1YEL059C-A 225 nt-7.15□□□□□ -3.55
PEP1P32319 YBL071C-BYBL071C-B 99 nt-7.15□□□□□ -3.55
PEP1P32319 snR47snR47 99 nt-7.23□□□□□ -3.57
PEP1P32319 snR52snR52 92 nt-7.29□□□□□ -3.58
PEP1P32319 YBL053WYBL053W 375 nt-7.32□□□□□ -3.58
PEP1P32319 YNL170WYNL170W 396 nt-7.36□□□□□ -3.59
PEP1P32319 YOR302WYOR302W 78 nt-7.37□□□□□ -3.59
PEP1P32319 SPG3YDR504C 384 nt-7.42□□□□□ -3.6
PEP1P32319 YGR151CYGR151C 336 nt-7.42□□□□□ -3.6
PEP1P32319 YNL277W-AYNL277W-A 189 nt-7.42□□□□□ -3.6
PEP1P32319 YKL225WYKL225W 348 nt-7.46□□□□□ -3.6
PEP1P32319 YLR285C-AYLR285C-A 171 nt-7.46□□□□□ -3.6
PEP1P32319 YHR175W-AYHR175W-A 150 nt-7.48□□□□□ -3.61
PEP1P32319 YDL159W-AYDL159W-A 132 nt-7.53□□□□□ -3.61
PEP1P32319 YAL037C-AYAL037C-A 93 nt-7.69□□□□□ -3.64
PEP1P32319 YNR025CYNR025C 360 nt-7.83□□□□□ -3.66
PEP1P32319 YEL050W-AYEL050W-A 192 nt-7.84□□□□□ -3.66
PEP1P32319 tS(GCU)Q1tS(GCU)Q1 86 nt-7.84□□□□□ -3.67
PEP1P32319 YDR034C-AYDR034C-A 177 nt-7.9□□□□□ -3.67
PEP1P32319 YGR122C-AYGR122C-A 129 nt-7.94□□□□□ -3.68
PEP1P32319 tC(GCA)QtC(GCA)Q 76 nt-8.12□□□□□ -3.71
PEP1P32319 YDL240C-AYDL240C-A 138 nt-8.23□□□□□ -3.73
PEP1P32319 YPL152W-AYPL152W-A 99 nt-8.31□□□□□ -3.74
PEP1P32319 YGL007C-AYGL007C-A 87 nt-8.58□□□□□ -3.78
PEP1P32319 YOR225WYOR225W 330 nt-8.74□□□□□ -3.81
PEP1P32319 snR65snR65 100 nt-8.76□□□□□ -3.81
PEP1P32319 YCL001W-BYCL001W-B 255 nt-8.85□□□□□ -3.83
Retrieved 100 of 7,029 protein–RNA pairs in 76.8 ms