Protein–RNA interactions for Protein: P27344

DPB3, DNA polymerase epsilon subunit C, yeastyeast

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DPB3P27344 snR45snR45 172 nt-0.16□□□□□ -2.44
DPB3P27344 tM(CAU)Q2tM(CAU)Q2 78 nt-0.19□□□□□ -2.44
DPB3P27344 YOR329W-AYOR329W-A 210 nt-0.19□□□□□ -2.44
DPB3P27344 snR39BsnR39B 96 nt-0.19□□□□□ -2.44
DPB3P27344 YLR342W-AYLR342W-A 174 nt-0.21□□□□□ -2.44
DPB3P27344 snR48snR48 113 nt-0.21□□□□□ -2.44
DPB3P27344 YGR146C-AYGR146C-A 162 nt-0.24□□□□□ -2.45
DPB3P27344 YGR164WYGR164W 336 nt-0.25□□□□□ -2.45
DPB3P27344 YJL077W-AYJL077W-A 87 nt-0.29□□□□□ -2.46
DPB3P27344 YDR406W-AYDR406W-A 246 nt-0.3□□□□□ -2.46
DPB3P27344 tL(UAA)QtL(UAA)Q 85 nt-0.31□□□□□ -2.46
DPB3P27344 snR69snR69 101 nt-0.32□□□□□ -2.46
DPB3P27344 YJL150WYJL150W 303 nt-0.36□□□□□ -2.47
DPB3P27344 YMR046W-AYMR046W-A 129 nt-0.37□□□□□ -2.47
DPB3P27344 YDL007C-AYDL007C-A 258 nt-0.39□□□□□ -2.47
DPB3P27344 PMP2YEL017C-A 132 nt-0.39□□□□□ -2.47
DPB3P27344 SPG3YDR504C 384 nt-0.41□□□□□ -2.48
DPB3P27344 YML100W-AYML100W-A 174 nt-0.42□□□□□ -2.48
DPB3P27344 JLP2YMR132C 627 nt-0.42□□□□□ -2.48
DPB3P27344 YOR102WYOR102W 351 nt-0.43□□□□□ -2.48
DPB3P27344 TFB5YDR079C-A 219 nt-0.44□□□□□ -2.48
DPB3P27344 YHL015W-AYHL015W-A 84 nt-0.44□□□□□ -2.48
DPB3P27344 tQ(UUG)QtQ(UUG)Q 76 nt-0.45□□□□□ -2.48
DPB3P27344 SBH2YER019C-A 267 nt-0.47□□□□□ -2.48
DPB3P27344 YNL067W-BYNL067W-B 141 nt-0.47□□□□□ -2.48
DPB3P27344 RDS3YPR094W 324 nt-0.48□□□□□ -2.49
DPB3P27344 YNL198CYNL198C 303 nt-0.51□□□□□ -2.49
DPB3P27344 YNL205CYNL205C 423 nt-0.51□□□□□ -2.49
DPB3P27344 SEC10YLR166C 2616 nt-0.52□□□□□ -2.49
DPB3P27344 YER090C-AYER090C-A 90 nt-0.53□□□□□ -2.49
DPB3P27344 tM(CAU)Q1tM(CAU)Q1 76 nt-0.55□□□□□ -2.5
DPB3P27344 YBL053WYBL053W 375 nt-0.57□□□□□ -2.5
DPB3P27344 tD(GUC)QtD(GUC)Q 75 nt-0.58□□□□□ -2.5
DPB3P27344 YNL266WYNL266W 420 nt-0.6□□□□□ -2.51
DPB3P27344 snR50snR50 90 nt-0.6□□□□□ -2.51
DPB3P27344 YIL071W-AYIL071W-A 477 nt-0.63□□□□□ -2.51
DPB3P27344 tA(UGC)QtA(UGC)Q 76 nt-0.67□□□□□ -2.52
DPB3P27344 YBR178WYBR178W 375 nt-0.67□□□□□ -2.52
DPB3P27344 URB1YKL014C 5295 nt-0.67□□□□□ -2.52
DPB3P27344 YLR286W-AYLR286W-A 135 nt-0.69□□□□□ -2.52
DPB3P27344 YJL113WYJL113W 4647 nt-0.7□□□□□ -2.52
DPB3P27344 YDL159C-BYDL159C-B 177 nt-0.76□□□□□ -2.53
DPB3P27344 PAU9YBL108C-A 129 nt-0.77□□□□□ -2.53
DPB3P27344 YLR466C-BYLR466C-B 117 nt-0.8□□□□□ -2.54
DPB3P27344 snR33snR33 183 nt-0.85□□□□□ -2.55
DPB3P27344 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
DPB3P27344 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
DPB3P27344 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
DPB3P27344 YBR196C-AYBR196C-A 150 nt-0.86□□□□□ -2.55
DPB3P27344 snR67snR67 82 nt-0.87□□□□□ -2.55
DPB3P27344 SOM1YEL059C-A 225 nt-0.87□□□□□ -2.55
DPB3P27344 YGR151CYGR151C 336 nt-0.88□□□□□ -2.55
DPB3P27344 YLR299C-AYLR299C-A 93 nt-0.92□□□□□ -2.56
DPB3P27344 YCR095W-AYCR095W-A 159 nt-0.93□□□□□ -2.56
DPB3P27344 YHL009W-BYHL009W-B 5409 nt-0.97□□□□□ -2.57
DPB3P27344 SKI7YOR076C 2244 nt-0.97□□□□□ -2.57
DPB3P27344 YNL338WYNL338W 159 nt-1□□□□□ -2.57
DPB3P27344 YNL337WYNL337W 255 nt-1.06□□□□□ -2.58
DPB3P27344 snR161snR161 161 nt-1.07□□□□□ -2.58
DPB3P27344 YML054C-AYML054C-A 159 nt-1.16□□□□□ -2.6
DPB3P27344 Q0032Q0032 291 nt-1.17□□□□□ -2.6
DPB3P27344 YCL001W-BYCL001W-B 255 nt-1.17□□□□□ -2.6
DPB3P27344 YGL007C-AYGL007C-A 87 nt-1.2□□□□□ -2.6
DPB3P27344 YBR223W-AYBR223W-A 120 nt-1.25□□□□□ -2.61
DPB3P27344 tP(UGG)QtP(UGG)Q 72 nt-1.27□□□□□ -2.61
DPB3P27344 YHR180C-BYHR180C-B 105 nt-1.29□□□□□ -2.62
DPB3P27344 YBL071C-BYBL071C-B 99 nt-1.42□□□□□ -2.64
DPB3P27344 YOL083C-AYOL083C-A 141 nt-1.43□□□□□ -2.64
DPB3P27344 YOR225WYOR225W 330 nt-1.5□□□□□ -2.65
DPB3P27344 YAL037C-AYAL037C-A 93 nt-1.51□□□□□ -2.65
DPB3P27344 YBR109W-AYBR109W-A 225 nt-1.52□□□□□ -2.65
DPB3P27344 YOR376W-AYOR376W-A 156 nt-1.53□□□□□ -2.65
DPB3P27344 YOL164W-AYOL164W-A 183 nt-1.56□□□□□ -2.66
DPB3P27344 snR81snR81 201 nt-1.59□□□□□ -2.66
DPB3P27344 YBR296C-AYBR296C-A 120 nt-1.59□□□□□ -2.66
DPB3P27344 YLR294CYLR294C 330 nt-1.6□□□□□ -2.67
DPB3P27344 tY(GUA)QtY(GUA)Q 84 nt-1.61□□□□□ -2.67
DPB3P27344 RPL41AYDL184C 78 nt-1.62□□□□□ -2.67
DPB3P27344 snR38snR38 95 nt-1.64□□□□□ -2.67
DPB3P27344 YKL106C-AYKL106C-A 120 nt-1.71□□□□□ -2.68
DPB3P27344 snR77snR77 88 nt-1.72□□□□□ -2.68
DPB3P27344 snR47snR47 99 nt-1.75□□□□□ -2.69
DPB3P27344 CDC65tQ(CUG)M 72 nt-1.76□□□□□ -2.69
DPB3P27344 YGR240C-AYGR240C-A 201 nt-1.77□□□□□ -2.69
DPB3P27344 YOR316C-AYOR316C-A 210 nt-1.77□□□□□ -2.69
DPB3P27344 YNR077CYNR077C 255 nt-1.8□□□□□ -2.7
DPB3P27344 YBL100W-CYBL100W-C 120 nt-1.8□□□□□ -2.7
DPB3P27344 YNL103W-AYNL103W-A 90 nt-1.86□□□□□ -2.71
DPB3P27344 YNL170WYNL170W 396 nt-1.88□□□□□ -2.71
DPB3P27344 YGL041C-BYGL041C-B 183 nt-1.91□□□□□ -2.72
DPB3P27344 snR61snR61 90 nt-1.92□□□□□ -2.72
DPB3P27344 YMR315W-AYMR315W-A 108 nt-1.98□□□□□ -2.73
DPB3P27344 tS(GCU)Q1tS(GCU)Q1 86 nt-2□□□□□ -2.73
DPB3P27344 ATP8Q0080 147 nt-2.07□□□□□ -2.74
DPB3P27344 YKL225WYKL225W 348 nt-2.08□□□□□ -2.74
DPB3P27344 YBR126W-BYBR126W-B 144 nt-2.14□□□□□ -2.75
DPB3P27344 YDR034C-AYDR034C-A 177 nt-2.22□□□□□ -2.76
DPB3P27344 snR62snR62 100 nt-2.23□□□□□ -2.77
DPB3P27344 YOR309CYOR309C 381 nt-2.26□□□□□ -2.77
DPB3P27344 tV(UAC)QtV(UAC)Q 76 nt-2.46□□□□□ -2.8
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms