Protein–RNA interactions for Protein: P25558

BUD3, Bud site selection protein 3, yeastyeast

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BUD3P25558 YLR406C-AYLR406C-A 150 nt-4.67□□□□□ -3.16
BUD3P25558 YOL155W-AYOL155W-A 135 nt-4.67□□□□□ -3.16
BUD3P25558 snR6snR6 112 nt-4.68□□□□□ -3.16
BUD3P25558 YHR180C-BYHR180C-B 105 nt-4.68□□□□□ -3.16
BUD3P25558 YOL038C-AYOL038C-A 96 nt-4.76□□□□□ -3.17
BUD3P25558 YOR381W-AYOR381W-A 168 nt-4.8□□□□□ -3.18
BUD3P25558 YPR012WYPR012W 255 nt-4.8□□□□□ -3.18
BUD3P25558 ATP6Q0085 780 nt-4.81□□□□□ -3.18
BUD3P25558 YLR299C-AYLR299C-A 93 nt-4.85□□□□□ -3.19
BUD3P25558 YAL016C-BYAL016C-B 186 nt-4.86□□□□□ -3.19
BUD3P25558 snR80snR80 171 nt-4.9□□□□□ -3.19
BUD3P25558 snR73snR73 106 nt-4.91□□□□□ -3.2
BUD3P25558 snR60snR60 104 nt-4.94□□□□□ -3.2
BUD3P25558 YKL106C-AYKL106C-A 120 nt-4.94□□□□□ -3.2
BUD3P25558 YNL324WYNL324W 396 nt-4.96□□□□□ -3.2
BUD3P25558 snR54snR54 86 nt-4.96□□□□□ -3.2
BUD3P25558 YJL150WYJL150W 303 nt-4.97□□□□□ -3.21
BUD3P25558 YNL028WYNL028W 318 nt-4.97□□□□□ -3.21
BUD3P25558 snR78snR78 87 nt-4.98□□□□□ -3.21
BUD3P25558 YNL198CYNL198C 303 nt-4.98□□□□□ -3.21
BUD3P25558 YOR335W-AYOR335W-A 81 nt-5.05□□□□□ -3.22
BUD3P25558 YOR329W-AYOR329W-A 210 nt-5.06□□□□□ -3.22
BUD3P25558 RPL41BYDL133C-A 78 nt-5.08□□□□□ -3.22
BUD3P25558 YGL041CYGL041C 204 nt-5.09□□□□□ -3.22
BUD3P25558 YMR001C-AYMR001C-A 231 nt-5.13□□□□□ -3.23
BUD3P25558 YER006C-AYER006C-A 318 nt-5.16□□□□□ -3.24
BUD3P25558 YDR413CYDR413C 576 nt-5.21□□□□□ -3.24
BUD3P25558 YLR120W-AYLR120W-A 102 nt-5.21□□□□□ -3.24
BUD3P25558 YEL014CYEL014C 306 nt-5.23□□□□□ -3.25
BUD3P25558 BIL1YOR304C-A 231 nt-5.29□□□□□ -3.26
BUD3P25558 YLR222C-AYLR222C-A 231 nt-5.31□□□□□ -3.26
BUD3P25558 YLR434CYLR434C 384 nt-5.34□□□□□ -3.26
BUD3P25558 YOR102WYOR102W 351 nt-5.4□□□□□ -3.27
BUD3P25558 Q0255Q0255 1419 nt-5.41□□□□□ -3.28
BUD3P25558 YBR109W-AYBR109W-A 225 nt-5.42□□□□□ -3.28
BUD3P25558 HTL1YCR020W-B 237 nt-5.45□□□□□ -3.28
BUD3P25558 snR87snR87 109 nt-5.48□□□□□ -3.29
BUD3P25558 tW(UCA)QtW(UCA)Q 74 nt-5.49□□□□□ -3.29
BUD3P25558 YLR412C-AYLR412C-A 207 nt-5.59□□□□□ -3.3
BUD3P25558 YGR035CYGR035C 351 nt-5.65□□□□□ -3.31
BUD3P25558 YAL066WYAL066W 309 nt-5.65□□□□□ -3.31
BUD3P25558 RPL41AYDL184C 78 nt-5.68□□□□□ -3.32
BUD3P25558 YBR296C-AYBR296C-A 120 nt-5.7□□□□□ -3.32
BUD3P25558 YGL188C-AYGL188C-A 141 nt-5.72□□□□□ -3.33
BUD3P25558 snR48snR48 113 nt-5.73□□□□□ -3.33
BUD3P25558 YKL118WYKL118W 312 nt-5.74□□□□□ -3.33
BUD3P25558 YDR406W-AYDR406W-A 246 nt-5.79□□□□□ -3.34
BUD3P25558 YBR131C-AYBR131C-A 90 nt-5.8□□□□□ -3.34
BUD3P25558 YNL097C-BYNL097C-B 123 nt-5.83□□□□□ -3.34
BUD3P25558 snR38snR38 95 nt-5.83□□□□□ -3.34
BUD3P25558 snR56snR56 88 nt-5.89□□□□□ -3.35
BUD3P25558 tF(GAA)QtF(GAA)Q 75 nt-5.92□□□□□ -3.36
BUD3P25558 GIM4YEL003W 336 nt-5.95□□□□□ -3.36
BUD3P25558 tL(UAA)QtL(UAA)Q 85 nt-5.96□□□□□ -3.36
BUD3P25558 snR85snR85 171 nt-5.99□□□□□ -3.37
BUD3P25558 YNL122CYNL122C 348 nt-6.03□□□□□ -3.38
BUD3P25558 YDR183C-AYDR183C-A 258 nt-6.08□□□□□ -3.38
BUD3P25558 YJL047C-AYJL047C-A 135 nt-6.08□□□□□ -3.38
BUD3P25558 tV(UAC)QtV(UAC)Q 76 nt-6.1□□□□□ -3.39
BUD3P25558 YAL063C-AYAL063C-A 291 nt-6.11□□□□□ -3.39
BUD3P25558 YJL136W-AYJL136W-A 84 nt-6.15□□□□□ -3.39
BUD3P25558 YPL038W-AYPL038W-A 192 nt-6.19□□□□□ -3.4
BUD3P25558 YDL114W-AYDL114W-A 114 nt-6.26□□□□□ -3.41
BUD3P25558 YKL123WYKL123W 381 nt-6.28□□□□□ -3.41
BUD3P25558 YCR095W-AYCR095W-A 159 nt-6.29□□□□□ -3.42
BUD3P25558 RPL39YJL189W 156 nt-6.32□□□□□ -3.42
BUD3P25558 snR58snR58 96 nt-6.33□□□□□ -3.42
BUD3P25558 YDR157WYDR157W 402 nt-6.39□□□□□ -3.43
BUD3P25558 YDR118W-AYDR118W-A 117 nt-6.47□□□□□ -3.45
BUD3P25558 YHL015W-AYHL015W-A 84 nt-6.55□□□□□ -3.46
BUD3P25558 YOL164W-AYOL164W-A 183 nt-6.58□□□□□ -3.46
BUD3P25558 YBL100W-CYBL100W-C 120 nt-6.6□□□□□ -3.47
BUD3P25558 SOM1YEL059C-A 225 nt-6.63□□□□□ -3.47
BUD3P25558 YBL071C-BYBL071C-B 99 nt-6.65□□□□□ -3.47
BUD3P25558 YKL096C-BYKL096C-B 150 nt-6.65□□□□□ -3.47
BUD3P25558 snR47snR47 99 nt-6.69□□□□□ -3.48
BUD3P25558 snR52snR52 92 nt-6.72□□□□□ -3.49
BUD3P25558 YLR285C-AYLR285C-A 171 nt-6.77□□□□□ -3.49
BUD3P25558 YOR302WYOR302W 78 nt-6.8□□□□□ -3.5
BUD3P25558 YBL053WYBL053W 375 nt-6.83□□□□□ -3.5
BUD3P25558 YGR151CYGR151C 336 nt-6.86□□□□□ -3.51
BUD3P25558 YNL277W-AYNL277W-A 189 nt-6.9□□□□□ -3.51
BUD3P25558 YKL225WYKL225W 348 nt-6.93□□□□□ -3.52
BUD3P25558 YDL159W-AYDL159W-A 132 nt-6.94□□□□□ -3.52
BUD3P25558 YHR175W-AYHR175W-A 150 nt-6.95□□□□□ -3.52
BUD3P25558 SPG3YDR504C 384 nt-6.98□□□□□ -3.53
BUD3P25558 YNL170WYNL170W 396 nt-6.98□□□□□ -3.53
BUD3P25558 YAL037C-AYAL037C-A 93 nt-7.15□□□□□ -3.55
BUD3P25558 YNR025CYNR025C 360 nt-7.15□□□□□ -3.55
BUD3P25558 YEL050W-AYEL050W-A 192 nt-7.25□□□□□ -3.57
BUD3P25558 tS(GCU)Q1tS(GCU)Q1 86 nt-7.29□□□□□ -3.58
BUD3P25558 YGR122C-AYGR122C-A 129 nt-7.41□□□□□ -3.6
BUD3P25558 YDR034C-AYDR034C-A 177 nt-7.43□□□□□ -3.6
BUD3P25558 YDL240C-AYDL240C-A 138 nt-7.53□□□□□ -3.62
BUD3P25558 tC(GCA)QtC(GCA)Q 76 nt-7.55□□□□□ -3.62
BUD3P25558 YPL152W-AYPL152W-A 99 nt-7.74□□□□□ -3.65
BUD3P25558 YGL007C-AYGL007C-A 87 nt-8□□□□□ -3.69
BUD3P25558 snR65snR65 100 nt-8.09□□□□□ -3.7
BUD3P25558 YOR225WYOR225W 330 nt-8.14□□□□□ -3.71
BUD3P25558 snR40snR40 97 nt-8.27□□□□□ -3.73
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms