Protein–RNA interactions for Protein: P20604

SIT4, Serine/threonine-protein phosphatase PP1-1, yeastyeast

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT4P20604 YER078W-AYER078W-A 165 nt1.78□□□□□ -2.12
SIT4P20604 YLL006W-AYLL006W-A 177 nt1.78□□□□□ -2.12
SIT4P20604 VPS15YBR097W 4365 nt1.77□□□□□ -2.13
SIT4P20604 NIP1YMR309C 2439 nt1.77□□□□□ -2.13
SIT4P20604 IML1YJR138W 4755 nt1.77□□□□□ -2.13
SIT4P20604 YDL159W-AYDL159W-A 132 nt1.77□□□□□ -2.13
SIT4P20604 PAU12YGR294W 363 nt1.77□□□□□ -2.13
SIT4P20604 snR75snR75 89 nt1.76□□□□□ -2.13
SIT4P20604 BUL2YML111W 2763 nt1.76□□□□□ -2.13
SIT4P20604 snR38snR38 95 nt1.75□□□□□ -2.13
SIT4P20604 CDC39YCR093W 6327 nt1.74□□□□□ -2.13
SIT4P20604 FYV8YGR196C 2454 nt1.74□□□□□ -2.13
SIT4P20604 tQ(UUG)QtQ(UUG)Q 76 nt1.73□□□□□ -2.13
SIT4P20604 NST1YNL091W 3723 nt1.71□□□□□ -2.13
SIT4P20604 AI1Q0050 2505 nt1.71□□□□□ -2.14
SIT4P20604 YGR122C-AYGR122C-A 129 nt1.68□□□□□ -2.14
SIT4P20604 IRA1YBR140C 9279 nt1.67□□□□□ -2.14
SIT4P20604 MYO1YHR023W 5787 nt1.67□□□□□ -2.14
SIT4P20604 PAU24YBR301W 363 nt1.65□□□□□ -2.15
SIT4P20604 YPL060C-AYPL060C-A 3315 nt1.64□□□□□ -2.15
SIT4P20604 SPT7YBR081C 3999 nt1.63□□□□□ -2.15
SIT4P20604 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)E1tH(GUG)E1 72 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)E2tH(GUG)E2 72 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)G1tH(GUG)G1 72 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)G2tH(GUG)G2 72 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)HtH(GUG)H 72 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)KtH(GUG)K 72 nt1.62□□□□□ -2.15
SIT4P20604 tH(GUG)MtH(GUG)M 72 nt1.62□□□□□ -2.15
SIT4P20604 tV(UAC)BtV(UAC)B 74 nt1.54□□□□□ -2.16
SIT4P20604 tV(UAC)DtV(UAC)D 74 nt1.54□□□□□ -2.16
SIT4P20604 YER090C-AYER090C-A 90 nt1.53□□□□□ -2.16
SIT4P20604 YNL284C-BYNL284C-B 5268 nt1.49□□□□□ -2.17
SIT4P20604 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
SIT4P20604 YOR192C-BYOR192C-B 5313 nt1.43□□□□□ -2.18
SIT4P20604 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
SIT4P20604 snR67snR67 82 nt1.4□□□□□ -2.19
SIT4P20604 YPR117WYPR117W 7470 nt1.4□□□□□ -2.19
SIT4P20604 RKR1YMR247C 4689 nt1.39□□□□□ -2.19
SIT4P20604 PET111YMR257C 2403 nt1.38□□□□□ -2.19
SIT4P20604 UTP20YBL004W 7482 nt1.38□□□□□ -2.19
SIT4P20604 YNL054W-BYNL054W-B 5250 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)BtF(GAA)B 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)FtF(GAA)F 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)GtF(GAA)G 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)H1tF(GAA)H1 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)H2tF(GAA)H2 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)MtF(GAA)M 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)P1tF(GAA)P1 73 nt1.33□□□□□ -2.2
SIT4P20604 tF(GAA)P2tF(GAA)P2 73 nt1.33□□□□□ -2.2
SIT4P20604 VAM6YDL077C 3150 nt1.33□□□□□ -2.2
SIT4P20604 BUD3YCL014W 4911 nt1.31□□□□□ -2.2
SIT4P20604 SCC2YDR180W 4482 nt1.3□□□□□ -2.2
SIT4P20604 LTE1YAL024C 4308 nt1.24□□□□□ -2.21
SIT4P20604 MLP2YIL149C 5040 nt1.23□□□□□ -2.21
SIT4P20604 DOP1YDR141C 5097 nt1.2□□□□□ -2.22
SIT4P20604 YKL106C-AYKL106C-A 120 nt1.18□□□□□ -2.22
SIT4P20604 YDL114W-AYDL114W-A 114 nt1.14□□□□□ -2.23
SIT4P20604 YOL014WYOL014W 375 nt1.14□□□□□ -2.23
SIT4P20604 YMR160WYMR160W 2451 nt1.14□□□□□ -2.23
SIT4P20604 YBL100W-BYBL100W-B 5313 nt1.09□□□□□ -2.24
SIT4P20604 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
SIT4P20604 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
SIT4P20604 MLP1YKR095W 5628 nt1.07□□□□□ -2.24
SIT4P20604 BEM2YER155C 6504 nt1.07□□□□□ -2.24
SIT4P20604 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
SIT4P20604 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
SIT4P20604 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
SIT4P20604 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
SIT4P20604 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
SIT4P20604 tV(UAC)QtV(UAC)Q 76 nt0.98□□□□□ -2.25
SIT4P20604 YKL145W-AYKL145W-A 93 nt0.96□□□□□ -2.26
SIT4P20604 YOR186C-AYOR186C-A 210 nt0.96□□□□□ -2.26
SIT4P20604 tT(AGU)BtT(AGU)B 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)CtT(AGU)C 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)DtT(AGU)D 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)HtT(AGU)H 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)I1tT(AGU)I1 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)I2tT(AGU)I2 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)JtT(AGU)J 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)N1tT(AGU)N1 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)N2tT(AGU)N2 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)O1tT(AGU)O1 73 nt0.94□□□□□ -2.26
SIT4P20604 tT(AGU)O2tT(AGU)O2 73 nt0.94□□□□□ -2.26
SIT4P20604 IQG1YPL242C 4488 nt0.93□□□□□ -2.26
SIT4P20604 YOR376W-AYOR376W-A 156 nt0.9□□□□□ -2.27
SIT4P20604 YML100W-AYML100W-A 174 nt0.86□□□□□ -2.27
SIT4P20604 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
SIT4P20604 FMP27YLR454W 7887 nt0.83□□□□□ -2.28
SIT4P20604 YOR316C-AYOR316C-A 210 nt0.75□□□□□ -2.29
SIT4P20604 UTP10YJL109C 5310 nt0.75□□□□□ -2.29
SIT4P20604 snR77snR77 88 nt0.72□□□□□ -2.29
SIT4P20604 snR40snR40 97 nt0.71□□□□□ -2.3
SIT4P20604 THO2YNL139C 4794 nt0.7□□□□□ -2.3
SIT4P20604 SBH2YER019C-A 267 nt0.69□□□□□ -2.3
SIT4P20604 PAU9YBL108C-A 129 nt0.63□□□□□ -2.31
SIT4P20604 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
SIT4P20604 SOV1YMR066W 2697 nt0.62□□□□□ -2.31
SIT4P20604 snR128snR128 126 nt0.59□□□□□ -2.31
SIT4P20604 ESP1YGR098C 4893 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms