Protein–RNA interactions for Protein: P0C0V2

YER188C-A, UPF0320 protein YER188C-A, yeastyeast

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YER188C-AP0C0V2 YHL015W-AYHL015W-A 84 nt-0.16□□□□□ -2.44
YER188C-AP0C0V2 YNL067W-BYNL067W-B 141 nt-0.16□□□□□ -2.44
YER188C-AP0C0V2 YBR178WYBR178W 375 nt-0.17□□□□□ -2.44
YER188C-AP0C0V2 YIL071W-AYIL071W-A 477 nt-0.18□□□□□ -2.44
YER188C-AP0C0V2 YJL150WYJL150W 303 nt-0.18□□□□□ -2.44
YER188C-AP0C0V2 JLP2YMR132C 627 nt-0.18□□□□□ -2.44
YER188C-AP0C0V2 YNL198CYNL198C 303 nt-0.18□□□□□ -2.44
YER188C-AP0C0V2 PMP2YEL017C-A 132 nt-0.19□□□□□ -2.44
YER188C-AP0C0V2 YNL266WYNL266W 420 nt-0.2□□□□□ -2.44
YER188C-AP0C0V2 YDL007C-AYDL007C-A 258 nt-0.21□□□□□ -2.44
YER188C-AP0C0V2 SPG3YDR504C 384 nt-0.21□□□□□ -2.44
YER188C-AP0C0V2 YGR146C-AYGR146C-A 162 nt-0.21□□□□□ -2.44
YER188C-AP0C0V2 YML100W-AYML100W-A 174 nt-0.21□□□□□ -2.44
YER188C-AP0C0V2 YOR102WYOR102W 351 nt-0.21□□□□□ -2.44
YER188C-AP0C0V2 RDS3YPR094W 324 nt-0.21□□□□□ -2.44
YER188C-AP0C0V2 YJL077W-AYJL077W-A 87 nt-0.22□□□□□ -2.44
YER188C-AP0C0V2 snR45snR45 172 nt-0.22□□□□□ -2.44
YER188C-AP0C0V2 STF2YGR008C 255 nt-0.23□□□□□ -2.45
YER188C-AP0C0V2 snR48snR48 113 nt-0.23□□□□□ -2.45
YER188C-AP0C0V2 tD(GUC)QtD(GUC)Q 75 nt-0.24□□□□□ -2.45
YER188C-AP0C0V2 YER090C-AYER090C-A 90 nt-0.25□□□□□ -2.45
YER188C-AP0C0V2 SEC10YLR166C 2616 nt-0.26□□□□□ -2.45
YER188C-AP0C0V2 YER078W-AYER078W-A 165 nt-0.26□□□□□ -2.45
YER188C-AP0C0V2 YLR286W-AYLR286W-A 135 nt-0.26□□□□□ -2.45
YER188C-AP0C0V2 YPL060C-AYPL060C-A 3315 nt-0.26□□□□□ -2.45
YER188C-AP0C0V2 tA(UGC)QtA(UGC)Q 76 nt-0.27□□□□□ -2.45
YER188C-AP0C0V2 YNL205CYNL205C 423 nt-0.27□□□□□ -2.45
YER188C-AP0C0V2 YDL159C-BYDL159C-B 177 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)BtF(GAA)B 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)FtF(GAA)F 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)GtF(GAA)G 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)H1tF(GAA)H1 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)H2tF(GAA)H2 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)MtF(GAA)M 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)P1tF(GAA)P1 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 tF(GAA)P2tF(GAA)P2 73 nt-0.28□□□□□ -2.45
YER188C-AP0C0V2 YBR196C-AYBR196C-A 150 nt-0.31□□□□□ -2.46
YER188C-AP0C0V2 YJL113WYJL113W 4647 nt-0.32□□□□□ -2.46
YER188C-AP0C0V2 snR67snR67 82 nt-0.32□□□□□ -2.46
YER188C-AP0C0V2 YNL338WYNL338W 159 nt-0.32□□□□□ -2.46
YER188C-AP0C0V2 YMR046W-AYMR046W-A 129 nt-0.33□□□□□ -2.46
YER188C-AP0C0V2 SKI7YOR076C 2244 nt-0.33□□□□□ -2.46
YER188C-AP0C0V2 SOM1YEL059C-A 225 nt-0.34□□□□□ -2.46
YER188C-AP0C0V2 YGR151CYGR151C 336 nt-0.34□□□□□ -2.46
YER188C-AP0C0V2 YLR299C-AYLR299C-A 93 nt-0.34□□□□□ -2.46
YER188C-AP0C0V2 YLR466C-BYLR466C-B 117 nt-0.35□□□□□ -2.47
YER188C-AP0C0V2 YML054C-AYML054C-A 159 nt-0.36□□□□□ -2.47
YER188C-AP0C0V2 YOL014WYOL014W 375 nt-0.36□□□□□ -2.47
YER188C-AP0C0V2 RPM2YML091C 3609 nt-0.37□□□□□ -2.47
YER188C-AP0C0V2 TFB5YDR079C-A 219 nt-0.38□□□□□ -2.47
YER188C-AP0C0V2 snR161snR161 161 nt-0.38□□□□□ -2.47
YER188C-AP0C0V2 snR33snR33 183 nt-0.39□□□□□ -2.47
YER188C-AP0C0V2 tM(CAU)Q1tM(CAU)Q1 76 nt-0.41□□□□□ -2.48
YER188C-AP0C0V2 YCL001W-BYCL001W-B 255 nt-0.41□□□□□ -2.48
YER188C-AP0C0V2 YCR095W-AYCR095W-A 159 nt-0.42□□□□□ -2.48
YER188C-AP0C0V2 YHR180C-BYHR180C-B 105 nt-0.43□□□□□ -2.48
YER188C-AP0C0V2 YOL083C-AYOL083C-A 141 nt-0.44□□□□□ -2.48
YER188C-AP0C0V2 tP(UGG)QtP(UGG)Q 72 nt-0.46□□□□□ -2.48
YER188C-AP0C0V2 tT(UGU)G1tT(UGU)G1 72 nt-0.46□□□□□ -2.48
YER188C-AP0C0V2 tT(UGU)G2tT(UGU)G2 72 nt-0.46□□□□□ -2.48
YER188C-AP0C0V2 tT(UGU)PtT(UGU)P 72 nt-0.46□□□□□ -2.48
YER188C-AP0C0V2 YBL071C-BYBL071C-B 99 nt-0.5□□□□□ -2.49
YER188C-AP0C0V2 YOR376W-AYOR376W-A 156 nt-0.51□□□□□ -2.49
YER188C-AP0C0V2 YHL009W-BYHL009W-B 5409 nt-0.54□□□□□ -2.5
YER188C-AP0C0V2 YNL337WYNL337W 255 nt-0.54□□□□□ -2.5
YER188C-AP0C0V2 YBR109W-AYBR109W-A 225 nt-0.55□□□□□ -2.5
YER188C-AP0C0V2 snR47snR47 99 nt-0.55□□□□□ -2.5
YER188C-AP0C0V2 snR77snR77 88 nt-0.56□□□□□ -2.5
YER188C-AP0C0V2 RPL41AYDL184C 78 nt-0.56□□□□□ -2.5
YER188C-AP0C0V2 YOL164W-AYOL164W-A 183 nt-0.57□□□□□ -2.5
YER188C-AP0C0V2 snR81snR81 201 nt-0.58□□□□□ -2.5
YER188C-AP0C0V2 YKL106C-AYKL106C-A 120 nt-0.58□□□□□ -2.5
YER188C-AP0C0V2 snR38snR38 95 nt-0.58□□□□□ -2.5
YER188C-AP0C0V2 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
YER188C-AP0C0V2 YBR296C-AYBR296C-A 120 nt-0.59□□□□□ -2.5
YER188C-AP0C0V2 tS(GCU)Q1tS(GCU)Q1 86 nt-0.6□□□□□ -2.51
YER188C-AP0C0V2 CDC65tQ(CUG)M 72 nt-0.61□□□□□ -2.51
YER188C-AP0C0V2 YGL007C-AYGL007C-A 87 nt-0.62□□□□□ -2.51
YER188C-AP0C0V2 YGR240C-AYGR240C-A 201 nt-0.63□□□□□ -2.51
YER188C-AP0C0V2 YAL037C-AYAL037C-A 93 nt-0.63□□□□□ -2.51
YER188C-AP0C0V2 YMR315W-AYMR315W-A 108 nt-0.63□□□□□ -2.51
YER188C-AP0C0V2 YNL103W-AYNL103W-A 90 nt-0.64□□□□□ -2.51
YER188C-AP0C0V2 Q0032Q0032 291 nt-0.65□□□□□ -2.51
YER188C-AP0C0V2 YGL041C-BYGL041C-B 183 nt-0.65□□□□□ -2.51
YER188C-AP0C0V2 YLR294CYLR294C 330 nt-0.65□□□□□ -2.51
YER188C-AP0C0V2 YBL100W-CYBL100W-C 120 nt-0.67□□□□□ -2.52
YER188C-AP0C0V2 YOR316C-AYOR316C-A 210 nt-0.68□□□□□ -2.52
YER188C-AP0C0V2 YNL170WYNL170W 396 nt-0.69□□□□□ -2.52
YER188C-AP0C0V2 YOR225WYOR225W 330 nt-0.7□□□□□ -2.52
YER188C-AP0C0V2 YKL225WYKL225W 348 nt-0.73□□□□□ -2.53
YER188C-AP0C0V2 snR61snR61 90 nt-0.76□□□□□ -2.53
YER188C-AP0C0V2 YDR034C-AYDR034C-A 177 nt-0.76□□□□□ -2.53
YER188C-AP0C0V2 tY(GUA)QtY(GUA)Q 84 nt-0.76□□□□□ -2.53
YER188C-AP0C0V2 YBR223W-AYBR223W-A 120 nt-0.76□□□□□ -2.53
YER188C-AP0C0V2 YOR309CYOR309C 381 nt-0.79□□□□□ -2.54
YER188C-AP0C0V2 YDL159W-AYDL159W-A 132 nt-0.82□□□□□ -2.54
YER188C-AP0C0V2 ATP8Q0080 147 nt-0.84□□□□□ -2.54
YER188C-AP0C0V2 YDL114W-AYDL114W-A 114 nt-0.85□□□□□ -2.55
YER188C-AP0C0V2 YOR335W-AYOR335W-A 81 nt-0.85□□□□□ -2.55
YER188C-AP0C0V2 snR62snR62 100 nt-0.86□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 85.6 ms