Protein–RNA interactions for Protein: P09880

TRL1, tRNA ligase, yeastyeast

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRL1P09880 YLR286W-AYLR286W-A 135 nt1.14□□□□□ -2.23
TRL1P09880 EST1YLR233C 2100 nt1.13□□□□□ -2.23
TRL1P09880 YIL142C-AYIL142C-A 333 nt1.12□□□□□ -2.23
TRL1P09880 PET111YMR257C 2403 nt1.12□□□□□ -2.23
TRL1P09880 RDS3YPR094W 324 nt1.11□□□□□ -2.23
TRL1P09880 BUL2YML111W 2763 nt1.1□□□□□ -2.23
TRL1P09880 YJR029WYJR029W 5268 nt1.09□□□□□ -2.23
TRL1P09880 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.23
TRL1P09880 YBL071C-BYBL071C-B 99 nt1.09□□□□□ -2.23
TRL1P09880 PAU24YBR301W 363 nt1.08□□□□□ -2.24
TRL1P09880 YOR192C-BYOR192C-B 5313 nt1.07□□□□□ -2.24
TRL1P09880 RPS26AYGL189C 360 nt1.06□□□□□ -2.24
TRL1P09880 snR62snR62 100 nt1.05□□□□□ -2.24
TRL1P09880 YLR299C-AYLR299C-A 93 nt1.05□□□□□ -2.24
TRL1P09880 MLP1YKR095W 5628 nt1.04□□□□□ -2.24
TRL1P09880 YDL159C-BYDL159C-B 177 nt1.04□□□□□ -2.24
TRL1P09880 YLL066W-BYLL066W-B 171 nt1.03□□□□□ -2.24
TRL1P09880 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
TRL1P09880 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
TRL1P09880 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
TRL1P09880 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
TRL1P09880 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
TRL1P09880 YDR371C-AYDR371C-A 105 nt1□□□□□ -2.25
TRL1P09880 PAU12YGR294W 363 nt1□□□□□ -2.25
TRL1P09880 tQ(UUG)QtQ(UUG)Q 76 nt1□□□□□ -2.25
TRL1P09880 YOL164W-AYOL164W-A 183 nt1□□□□□ -2.25
TRL1P09880 BUD3YCL014W 4911 nt1□□□□□ -2.25
TRL1P09880 snR45snR45 172 nt0.96□□□□□ -2.26
TRL1P09880 YGR240C-AYGR240C-A 201 nt0.95□□□□□ -2.26
TRL1P09880 YPL060C-AYPL060C-A 3315 nt0.91□□□□□ -2.26
TRL1P09880 YPR159C-AYPR159C-A 102 nt0.89□□□□□ -2.27
TRL1P09880 YDR034C-AYDR034C-A 177 nt0.88□□□□□ -2.27
TRL1P09880 ORC3YLL004W 1851 nt0.88□□□□□ -2.27
TRL1P09880 MYO1YHR023W 5787 nt0.87□□□□□ -2.27
TRL1P09880 tF(GAA)BtF(GAA)B 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)FtF(GAA)F 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)GtF(GAA)G 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)H1tF(GAA)H1 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)H2tF(GAA)H2 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)MtF(GAA)M 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)P1tF(GAA)P1 73 nt0.86□□□□□ -2.27
TRL1P09880 tF(GAA)P2tF(GAA)P2 73 nt0.86□□□□□ -2.27
TRL1P09880 snR47snR47 99 nt0.86□□□□□ -2.27
TRL1P09880 tT(AGU)BtT(AGU)B 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)CtT(AGU)C 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)DtT(AGU)D 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)HtT(AGU)H 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)I1tT(AGU)I1 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)I2tT(AGU)I2 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)JtT(AGU)J 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)N1tT(AGU)N1 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)N2tT(AGU)N2 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)O1tT(AGU)O1 73 nt0.85□□□□□ -2.27
TRL1P09880 tT(AGU)O2tT(AGU)O2 73 nt0.85□□□□□ -2.27
TRL1P09880 YHR180C-BYHR180C-B 105 nt0.82□□□□□ -2.28
TRL1P09880 AI1Q0050 2505 nt0.81□□□□□ -2.28
TRL1P09880 YOR186C-AYOR186C-A 210 nt0.8□□□□□ -2.28
TRL1P09880 YER090C-AYER090C-A 90 nt0.79□□□□□ -2.28
TRL1P09880 YML054C-AYML054C-A 159 nt0.78□□□□□ -2.28
TRL1P09880 IQG1YPL242C 4488 nt0.76□□□□□ -2.29
TRL1P09880 YBL100W-BYBL100W-B 5313 nt0.75□□□□□ -2.29
TRL1P09880 MLP2YIL149C 5040 nt0.73□□□□□ -2.29
TRL1P09880 YMR160WYMR160W 2451 nt0.72□□□□□ -2.29
TRL1P09880 YOL014WYOL014W 375 nt0.72□□□□□ -2.29
TRL1P09880 snR50snR50 90 nt0.72□□□□□ -2.29
TRL1P09880 UTP10YJL109C 5310 nt0.71□□□□□ -2.3
TRL1P09880 YKL145W-AYKL145W-A 93 nt0.69□□□□□ -2.3
TRL1P09880 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
TRL1P09880 UTP20YBL004W 7482 nt0.69□□□□□ -2.3
TRL1P09880 RPL41AYDL184C 78 nt0.67□□□□□ -2.3
TRL1P09880 YNL054W-BYNL054W-B 5250 nt0.64□□□□□ -2.31
TRL1P09880 snR67snR67 82 nt0.63□□□□□ -2.31
TRL1P09880 YBR296C-AYBR296C-A 120 nt0.63□□□□□ -2.31
TRL1P09880 YBR109W-AYBR109W-A 225 nt0.59□□□□□ -2.31
TRL1P09880 FMP27YLR454W 7887 nt0.58□□□□□ -2.32
TRL1P09880 YKL225WYKL225W 348 nt0.53□□□□□ -2.32
TRL1P09880 snR64snR64 101 nt0.49□□□□□ -2.33
TRL1P09880 YOL013W-AYOL013W-A 192 nt0.41□□□□□ -2.34
TRL1P09880 ESP1YGR098C 4893 nt0.4□□□□□ -2.34
TRL1P09880 snR38snR38 95 nt0.4□□□□□ -2.35
TRL1P09880 snR53snR53 91 nt0.38□□□□□ -2.35
TRL1P09880 YML100W-AYML100W-A 174 nt0.37□□□□□ -2.35
TRL1P09880 snR128snR128 126 nt0.37□□□□□ -2.35
TRL1P09880 SOV1YMR066W 2697 nt0.36□□□□□ -2.35
TRL1P09880 YER078W-AYER078W-A 165 nt0.31□□□□□ -2.36
TRL1P09880 SKI7YOR076C 2244 nt0.28□□□□□ -2.36
TRL1P09880 THO2YNL139C 4794 nt0.21□□□□□ -2.38
TRL1P09880 PAU9YBL108C-A 129 nt0.17□□□□□ -2.38
TRL1P09880 YKL106C-AYKL106C-A 120 nt0.16□□□□□ -2.38
TRL1P09880 YGR122C-AYGR122C-A 129 nt0.07□□□□□ -2.4
TRL1P09880 YDL159W-AYDL159W-A 132 nt0.05□□□□□ -2.4
TRL1P09880 YJL113WYJL113W 4647 nt-0.03□□□□□ -2.41
TRL1P09880 tA(UGC)QtA(UGC)Q 76 nt-0.07□□□□□ -2.42
TRL1P09880 SBH2YER019C-A 267 nt-0.09□□□□□ -2.42
TRL1P09880 YOR376W-AYOR376W-A 156 nt-0.12□□□□□ -2.43
TRL1P09880 YLR149C-AYLR149C-A 87 nt-0.17□□□□□ -2.44
TRL1P09880 YOR316C-AYOR316C-A 210 nt-0.17□□□□□ -2.44
TRL1P09880 YDL114W-AYDL114W-A 114 nt-0.19□□□□□ -2.44
TRL1P09880 snR161snR161 161 nt-0.29□□□□□ -2.46
TRL1P09880 YKL096C-BYKL096C-B 150 nt-0.32□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 76.6 ms