Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TSPAN3O60637 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
TSPAN3O60637 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.56■□□□□ 0.88
TSPAN3O60637 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.56■□□□□ 0.88
TSPAN3O60637 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.56■□□□□ 0.88
TSPAN3O60637 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.56■□□□□ 0.88
TSPAN3O60637 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.56■□□□□ 0.88
TSPAN3O60637 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TSPAN3O60637 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.56■□□□□ 0.88
TSPAN3O60637 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TSPAN3O60637 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.55■□□□□ 0.88
TSPAN3O60637 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.55■□□□□ 0.88
TSPAN3O60637 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 AC073314.1-201ENST00000568729 2216 ntBASIC20.55■□□□□ 0.88
TSPAN3O60637 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.55■□□□□ 0.88
TSPAN3O60637 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TSPAN3O60637 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.55■□□□□ 0.88
TSPAN3O60637 RPS2P4-201ENST00000476944 856 ntBASIC20.55■□□□□ 0.88
TSPAN3O60637 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.55■□□□□ 0.88
TSPAN3O60637 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.55■□□□□ 0.88
TSPAN3O60637 PRKY-204ENST00000533551 1019 ntBASIC20.55■□□□□ 0.88
TSPAN3O60637 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.55■□□□□ 0.88
TSPAN3O60637 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TSPAN3O60637 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TSPAN3O60637 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TSPAN3O60637 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.54■□□□□ 0.88
TSPAN3O60637 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.54■□□□□ 0.88
TSPAN3O60637 AC008550.1-201ENST00000511500 884 ntBASIC20.54■□□□□ 0.88
TSPAN3O60637 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TSPAN3O60637 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.54■□□□□ 0.88
TSPAN3O60637 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.54■□□□□ 0.88
TSPAN3O60637 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.54■□□□□ 0.88
TSPAN3O60637 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TSPAN3O60637 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
TSPAN3O60637 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 AC020907.5-201ENST00000624372 1936 ntBASIC20.53■□□□□ 0.88
TSPAN3O60637 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.53■□□□□ 0.88
TSPAN3O60637 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.53■□□□□ 0.88
TSPAN3O60637 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.53■□□□□ 0.88
TSPAN3O60637 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.53■□□□□ 0.88
TSPAN3O60637 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.53■□□□□ 0.88
TSPAN3O60637 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.53■□□□□ 0.88
TSPAN3O60637 AL121829.2-201ENST00000620908 328 ntBASIC20.53■□□□□ 0.88
TSPAN3O60637 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.53■□□□□ 0.88
TSPAN3O60637 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
TSPAN3O60637 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
TSPAN3O60637 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.53■□□□□ 0.88
TSPAN3O60637 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TSPAN3O60637 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.53■□□□□ 0.88
TSPAN3O60637 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.52■□□□□ 0.88
TSPAN3O60637 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms