Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 DUSP5P2-201ENST00000426873 1033 ntBASIC15.07■□□□□ 0
TRAV2A0A0B4J234 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV2A0A0B4J234 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 ID1-201ENST00000376105 1233 ntBASIC15.06■□□□□ 0
TRAV2A0A0B4J234 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 AC069152.1-201ENST00000438030 544 ntBASIC15.06■□□□□ 0
TRAV2A0A0B4J234 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 KRT8P17-201ENST00000453110 1448 ntBASIC15.06■□□□□ 0
TRAV2A0A0B4J234 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 PTBP1P-201ENST00000554374 1601 ntBASIC15.06■□□□□ 0
TRAV2A0A0B4J234 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV2A0A0B4J234 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV2A0A0B4J234 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV2A0A0B4J234 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV2A0A0B4J234 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 MYC-209ENST00000641252 345 ntBASIC15.05■□□□□ -0
TRAV2A0A0B4J234 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 KRT16P6-202ENST00000425692 1426 ntBASIC15.05■□□□□ -0
TRAV2A0A0B4J234 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV2A0A0B4J234 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV2A0A0B4J234 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms