Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC097658.1-201ENST00000475555 843 ntBASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC090192.1-201ENST00000517740 490 ntBASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GUSBP6-202ENST00000438529 1198 ntBASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC091874.3-201ENST00000512672 1195 ntBASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL109923.1-201ENST00000618799 583 ntBASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-1A0A0A6YYK4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 TMEM179-206ENST00000616017 1645 ntBASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC112907.3-201ENST00000577781 2400 ntBASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms