Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Atp6v1c1Q9Z1G3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Atp6v1c1Q9Z1G3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Atp6v1c1Q9Z1G3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atp6v1c1Q9Z1G3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Atp6v1c1Q9Z1G3 Gm16148-201ENSMUST00000119653 893 ntBASIC23.17■■□□□ 1.3
Atp6v1c1Q9Z1G3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.17■■□□□ 1.3
Atp6v1c1Q9Z1G3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Atp6v1c1Q9Z1G3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Atp6v1c1Q9Z1G3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.16■■□□□ 1.3
Atp6v1c1Q9Z1G3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Atp6v1c1Q9Z1G3 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.16■■□□□ 1.3
Atp6v1c1Q9Z1G3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp6v1c1Q9Z1G3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Atp6v1c1Q9Z1G3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp6v1c1Q9Z1G3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Atp6v1c1Q9Z1G3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Atp6v1c1Q9Z1G3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Atp6v1c1Q9Z1G3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1c1Q9Z1G3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Atp6v1c1Q9Z1G3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.12■■□□□ 1.29
Atp6v1c1Q9Z1G3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.12■■□□□ 1.29
Atp6v1c1Q9Z1G3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Atp6v1c1Q9Z1G3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atp6v1c1Q9Z1G3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Atp6v1c1Q9Z1G3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Atp6v1c1Q9Z1G3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Atp6v1c1Q9Z1G3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atp6v1c1Q9Z1G3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Atp6v1c1Q9Z1G3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.1■■□□□ 1.29
Atp6v1c1Q9Z1G3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Atp6v1c1Q9Z1G3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Atp6v1c1Q9Z1G3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Atp6v1c1Q9Z1G3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Atp6v1c1Q9Z1G3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Atp6v1c1Q9Z1G3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Atp6v1c1Q9Z1G3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Atp6v1c1Q9Z1G3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Atp6v1c1Q9Z1G3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Atp6v1c1Q9Z1G3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Atp6v1c1Q9Z1G3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Atp6v1c1Q9Z1G3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Atp6v1c1Q9Z1G3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Atp6v1c1Q9Z1G3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Atp6v1c1Q9Z1G3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Atp6v1c1Q9Z1G3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.04■■□□□ 1.28
Atp6v1c1Q9Z1G3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
Atp6v1c1Q9Z1G3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Atp6v1c1Q9Z1G3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Atp6v1c1Q9Z1G3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Atp6v1c1Q9Z1G3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Atp6v1c1Q9Z1G3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Atp6v1c1Q9Z1G3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Atp6v1c1Q9Z1G3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Atp6v1c1Q9Z1G3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Atp6v1c1Q9Z1G3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23■■□□□ 1.27
Atp6v1c1Q9Z1G3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Atp6v1c1Q9Z1G3 Gm30346-201ENSMUST00000218641 1699 ntBASIC23■■□□□ 1.27
Atp6v1c1Q9Z1G3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Atp6v1c1Q9Z1G3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Atp6v1c1Q9Z1G3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atp6v1c1Q9Z1G3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atp6v1c1Q9Z1G3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Atp6v1c1Q9Z1G3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Atp6v1c1Q9Z1G3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Atp6v1c1Q9Z1G3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Atp6v1c1Q9Z1G3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Atp6v1c1Q9Z1G3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Atp6v1c1Q9Z1G3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atp6v1c1Q9Z1G3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atp6v1c1Q9Z1G3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atp6v1c1Q9Z1G3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Atp6v1c1Q9Z1G3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Atp6v1c1Q9Z1G3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Atp6v1c1Q9Z1G3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Atp6v1c1Q9Z1G3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Atp6v1c1Q9Z1G3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Atp6v1c1Q9Z1G3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
Atp6v1c1Q9Z1G3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Atp6v1c1Q9Z1G3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Atp6v1c1Q9Z1G3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Atp6v1c1Q9Z1G3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Atp6v1c1Q9Z1G3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Atp6v1c1Q9Z1G3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Atp6v1c1Q9Z1G3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Atp6v1c1Q9Z1G3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Atp6v1c1Q9Z1G3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms