Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.13■□□□□ 0.81
Cx3cr1Q9Z0D9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cx3cr1Q9Z0D9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cr1Q9Z0D9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cr1Q9Z0D9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cr1Q9Z0D9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cr1Q9Z0D9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cr1Q9Z0D9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cr1Q9Z0D9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cx3cr1Q9Z0D9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 Gm26115-201ENSMUST00000175605 87 ntBASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 Gm8109-201ENSMUST00000194076 746 ntBASIC20.06■□□□□ 0.8
Cx3cr1Q9Z0D9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cr1Q9Z0D9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Cx3cr1Q9Z0D9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cr1Q9Z0D9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cr1Q9Z0D9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cr1Q9Z0D9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cr1Q9Z0D9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cx3cr1Q9Z0D9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cr1Q9Z0D9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cr1Q9Z0D9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cx3cr1Q9Z0D9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cx3cr1Q9Z0D9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cr1Q9Z0D9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cr1Q9Z0D9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.98■□□□□ 0.79
Cx3cr1Q9Z0D9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cr1Q9Z0D9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cr1Q9Z0D9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cr1Q9Z0D9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Cx3cr1Q9Z0D9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cr1Q9Z0D9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cr1Q9Z0D9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cx3cr1Q9Z0D9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cr1Q9Z0D9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cr1Q9Z0D9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.93■□□□□ 0.78
Cx3cr1Q9Z0D9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cx3cr1Q9Z0D9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cr1Q9Z0D9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cr1Q9Z0D9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cr1Q9Z0D9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Cx3cr1Q9Z0D9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Gm16148-201ENSMUST00000119653 893 ntBASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms