Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cx3cr1Q9Z0D9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.13■□□□□ 0.81
Cx3cr1Q9Z0D9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cx3cr1Q9Z0D9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cx3cr1Q9Z0D9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cr1Q9Z0D9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cr1Q9Z0D9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cx3cr1Q9Z0D9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cx3cr1Q9Z0D9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cx3cr1Q9Z0D9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cr1Q9Z0D9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cr1Q9Z0D9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cx3cr1Q9Z0D9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cx3cr1Q9Z0D9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 Gm26115-201ENSMUST00000175605 87 ntBASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cx3cr1Q9Z0D9 Gm8109-201ENSMUST00000194076 746 ntBASIC20.06■□□□□ 0.8
Cx3cr1Q9Z0D9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cx3cr1Q9Z0D9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Cx3cr1Q9Z0D9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cx3cr1Q9Z0D9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cr1Q9Z0D9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cr1Q9Z0D9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cx3cr1Q9Z0D9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cx3cr1Q9Z0D9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cr1Q9Z0D9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cx3cr1Q9Z0D9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cx3cr1Q9Z0D9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cx3cr1Q9Z0D9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cr1Q9Z0D9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cx3cr1Q9Z0D9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cx3cr1Q9Z0D9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cx3cr1Q9Z0D9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.98■□□□□ 0.79
Cx3cr1Q9Z0D9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cr1Q9Z0D9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cx3cr1Q9Z0D9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cr1Q9Z0D9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Cx3cr1Q9Z0D9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cx3cr1Q9Z0D9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cx3cr1Q9Z0D9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cx3cr1Q9Z0D9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cr1Q9Z0D9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cx3cr1Q9Z0D9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cx3cr1Q9Z0D9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cx3cr1Q9Z0D9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.93■□□□□ 0.78
Cx3cr1Q9Z0D9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cx3cr1Q9Z0D9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cr1Q9Z0D9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cx3cr1Q9Z0D9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cx3cr1Q9Z0D9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cx3cr1Q9Z0D9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cx3cr1Q9Z0D9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Cx3cr1Q9Z0D9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Gm16148-201ENSMUST00000119653 893 ntBASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cx3cr1Q9Z0D9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms