Protein–RNA interactions for Protein: Q9R0Q6

Arpc1a, Actin-related protein 2/3 complex subunit 1A, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arpc1aQ9R0Q6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Arpc1aQ9R0Q6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Arpc1aQ9R0Q6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arpc1aQ9R0Q6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Arpc1aQ9R0Q6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Arpc1aQ9R0Q6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Arpc1aQ9R0Q6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Arpc1aQ9R0Q6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Arpc1aQ9R0Q6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Arpc1aQ9R0Q6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.92■□□□□ 0.62
Arpc1aQ9R0Q6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.92■□□□□ 0.62
Arpc1aQ9R0Q6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Arpc1aQ9R0Q6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arpc1aQ9R0Q6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arpc1aQ9R0Q6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arpc1aQ9R0Q6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Arpc1aQ9R0Q6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arpc1aQ9R0Q6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arpc1aQ9R0Q6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arpc1aQ9R0Q6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arpc1aQ9R0Q6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.87■□□□□ 0.61
Arpc1aQ9R0Q6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Arpc1aQ9R0Q6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arpc1aQ9R0Q6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arpc1aQ9R0Q6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arpc1aQ9R0Q6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Arpc1aQ9R0Q6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Arpc1aQ9R0Q6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arpc1aQ9R0Q6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Arpc1aQ9R0Q6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Arpc1aQ9R0Q6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arpc1aQ9R0Q6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.85■□□□□ 0.61
Arpc1aQ9R0Q6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arpc1aQ9R0Q6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.85■□□□□ 0.61
Arpc1aQ9R0Q6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Arpc1aQ9R0Q6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Arpc1aQ9R0Q6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Arpc1aQ9R0Q6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Arpc1aQ9R0Q6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Arpc1aQ9R0Q6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Arpc1aQ9R0Q6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Arpc1aQ9R0Q6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Arpc1aQ9R0Q6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Arpc1aQ9R0Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.81■□□□□ 0.6
Arpc1aQ9R0Q6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Arpc1aQ9R0Q6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Arpc1aQ9R0Q6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.8■□□□□ 0.6
Arpc1aQ9R0Q6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.8■□□□□ 0.6
Arpc1aQ9R0Q6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.8■□□□□ 0.6
Arpc1aQ9R0Q6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Arpc1aQ9R0Q6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.79■□□□□ 0.6
Arpc1aQ9R0Q6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Arpc1aQ9R0Q6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.78■□□□□ 0.6
Arpc1aQ9R0Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arpc1aQ9R0Q6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arpc1aQ9R0Q6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Arpc1aQ9R0Q6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Arpc1aQ9R0Q6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Arpc1aQ9R0Q6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Arpc1aQ9R0Q6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Arpc1aQ9R0Q6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Arpc1aQ9R0Q6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Arpc1aQ9R0Q6 Nkain2-201ENSMUST00000092602 558 ntBASIC18.76■□□□□ 0.59
Arpc1aQ9R0Q6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Arpc1aQ9R0Q6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Arpc1aQ9R0Q6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Arpc1aQ9R0Q6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Arpc1aQ9R0Q6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Arpc1aQ9R0Q6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Arpc1aQ9R0Q6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Arpc1aQ9R0Q6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Arpc1aQ9R0Q6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.73■□□□□ 0.59
Arpc1aQ9R0Q6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arpc1aQ9R0Q6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Arpc1aQ9R0Q6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Arpc1aQ9R0Q6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Arpc1aQ9R0Q6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Arpc1aQ9R0Q6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Arpc1aQ9R0Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Arpc1aQ9R0Q6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Arpc1aQ9R0Q6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.71■□□□□ 0.59
Arpc1aQ9R0Q6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Arpc1aQ9R0Q6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Arpc1aQ9R0Q6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Arpc1aQ9R0Q6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Arpc1aQ9R0Q6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.7■□□□□ 0.58
Arpc1aQ9R0Q6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Arpc1aQ9R0Q6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Arpc1aQ9R0Q6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arpc1aQ9R0Q6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arpc1aQ9R0Q6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Arpc1aQ9R0Q6 Gm6821-201ENSMUST00000107540 542 ntBASIC18.69■□□□□ 0.58
Arpc1aQ9R0Q6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms