Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Scn5aQ9JJV9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25,53■■□□□ 1,68
Scn5aQ9JJV9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25,52■■□□□ 1,68
Scn5aQ9JJV9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25,51■■□□□ 1,67
Scn5aQ9JJV9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25,51■■□□□ 1,67
Scn5aQ9JJV9 Particl-201ENSMUST00000205370 1560 ntBASIC25,51■■□□□ 1,67
Scn5aQ9JJV9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25,5■■□□□ 1,67
Scn5aQ9JJV9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25,5■■□□□ 1,67
Scn5aQ9JJV9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Scn5aQ9JJV9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
Scn5aQ9JJV9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,5■■□□□ 1,67
Scn5aQ9JJV9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25,49■■□□□ 1,67
Scn5aQ9JJV9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25,49■■□□□ 1,67
Scn5aQ9JJV9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25,49■■□□□ 1,67
Scn5aQ9JJV9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25,49■■□□□ 1,67
Scn5aQ9JJV9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Scn5aQ9JJV9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25,47■■□□□ 1,67
Scn5aQ9JJV9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25,46■■□□□ 1,67
Scn5aQ9JJV9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25,46■■□□□ 1,67
Scn5aQ9JJV9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,67
Scn5aQ9JJV9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25,44■■□□□ 1,66
Scn5aQ9JJV9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Scn5aQ9JJV9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25,44■■□□□ 1,66
Scn5aQ9JJV9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Scn5aQ9JJV9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25,41■■□□□ 1,66
Scn5aQ9JJV9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25,4■■□□□ 1,66
Scn5aQ9JJV9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Scn5aQ9JJV9 Pcf11-205ENSMUST00000208255 1720 ntBASIC25,4■■□□□ 1,66
Scn5aQ9JJV9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25,4■■□□□ 1,66
Scn5aQ9JJV9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25,39■■□□□ 1,66
Scn5aQ9JJV9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25,39■■□□□ 1,66
Scn5aQ9JJV9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25,39■■□□□ 1,65
Scn5aQ9JJV9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Scn5aQ9JJV9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Scn5aQ9JJV9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Scn5aQ9JJV9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25,38■■□□□ 1,65
Scn5aQ9JJV9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25,37■■□□□ 1,65
Scn5aQ9JJV9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25,37■■□□□ 1,65
Scn5aQ9JJV9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25,37■■□□□ 1,65
Scn5aQ9JJV9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Scn5aQ9JJV9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25,36■■□□□ 1,65
Scn5aQ9JJV9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25,36■■□□□ 1,65
Scn5aQ9JJV9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Scn5aQ9JJV9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25,36■■□□□ 1,65
Scn5aQ9JJV9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25,35■■□□□ 1,65
Scn5aQ9JJV9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25,35■■□□□ 1,65
Scn5aQ9JJV9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25,34■■□□□ 1,65
Scn5aQ9JJV9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25,34■■□□□ 1,65
Scn5aQ9JJV9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25,33■■□□□ 1,65
Scn5aQ9JJV9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Scn5aQ9JJV9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
Scn5aQ9JJV9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Scn5aQ9JJV9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Scn5aQ9JJV9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Scn5aQ9JJV9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Scn5aQ9JJV9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25,3■■□□□ 1,64
Scn5aQ9JJV9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25,29■■□□□ 1,64
Scn5aQ9JJV9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Scn5aQ9JJV9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Scn5aQ9JJV9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25,28■■□□□ 1,64
Scn5aQ9JJV9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Scn5aQ9JJV9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Scn5aQ9JJV9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25,25■■□□□ 1,63
Scn5aQ9JJV9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Scn5aQ9JJV9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25,25■■□□□ 1,63
Scn5aQ9JJV9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25,24■■□□□ 1,63
Scn5aQ9JJV9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,24■■□□□ 1,63
Scn5aQ9JJV9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25,23■■□□□ 1,63
Scn5aQ9JJV9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Scn5aQ9JJV9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Scn5aQ9JJV9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Scn5aQ9JJV9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25,2■■□□□ 1,63
Scn5aQ9JJV9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25,2■■□□□ 1,62
Scn5aQ9JJV9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25,19■■□□□ 1,62
Scn5aQ9JJV9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25,18■■□□□ 1,62
Scn5aQ9JJV9 Gm45364-201ENSMUST00000210883 159 ntBASIC25,18■■□□□ 1,62
Scn5aQ9JJV9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Scn5aQ9JJV9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25,17■■□□□ 1,62
Scn5aQ9JJV9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
Scn5aQ9JJV9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25,17■■□□□ 1,62
Scn5aQ9JJV9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25,17■■□□□ 1,62
Scn5aQ9JJV9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Scn5aQ9JJV9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Scn5aQ9JJV9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25,16■■□□□ 1,62
Scn5aQ9JJV9 Pkd1-207ENSMUST00000228550 1050 ntBASIC25,16■■□□□ 1,62
Scn5aQ9JJV9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25,16■■□□□ 1,62
Scn5aQ9JJV9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25,16■■□□□ 1,62
Scn5aQ9JJV9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25,15■■□□□ 1,62
Scn5aQ9JJV9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25,15■■□□□ 1,62
Scn5aQ9JJV9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25,15■■□□□ 1,62
Scn5aQ9JJV9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Scn5aQ9JJV9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25,14■■□□□ 1,62
Scn5aQ9JJV9 Scarna2-201ENSMUST00000157560 414 ntBASIC25,13■■□□□ 1,61
Scn5aQ9JJV9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25,13■■□□□ 1,61
Retrieved 100 of 76,532 protein–RNA pairs in 12,5 ms