Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h8Q9JJ48 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.33■■□□□ 1.17
Zc3h8Q9JJ48 Gm30023-201ENSMUST00000197970 889 ntBASIC22.33■■□□□ 1.17
Zc3h8Q9JJ48 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Zc3h8Q9JJ48 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.32■■□□□ 1.16
Zc3h8Q9JJ48 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Zc3h8Q9JJ48 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h8Q9JJ48 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.3■■□□□ 1.16
Zc3h8Q9JJ48 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h8Q9JJ48 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h8Q9JJ48 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h8Q9JJ48 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Zc3h8Q9JJ48 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
Zc3h8Q9JJ48 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Zc3h8Q9JJ48 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.28■■□□□ 1.16
Zc3h8Q9JJ48 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Zc3h8Q9JJ48 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Zc3h8Q9JJ48 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h8Q9JJ48 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h8Q9JJ48 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h8Q9JJ48 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h8Q9JJ48 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
Zc3h8Q9JJ48 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h8Q9JJ48 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Zc3h8Q9JJ48 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h8Q9JJ48 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.24■■□□□ 1.15
Zc3h8Q9JJ48 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zc3h8Q9JJ48 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Zc3h8Q9JJ48 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.23■■□□□ 1.15
Zc3h8Q9JJ48 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h8Q9JJ48 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h8Q9JJ48 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zc3h8Q9JJ48 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zc3h8Q9JJ48 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.19■■□□□ 1.14
Zc3h8Q9JJ48 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.19■■□□□ 1.14
Zc3h8Q9JJ48 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h8Q9JJ48 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h8Q9JJ48 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h8Q9JJ48 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Zc3h8Q9JJ48 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Zc3h8Q9JJ48 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Zc3h8Q9JJ48 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.18■■□□□ 1.14
Zc3h8Q9JJ48 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Zc3h8Q9JJ48 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zc3h8Q9JJ48 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.16■■□□□ 1.14
Zc3h8Q9JJ48 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zc3h8Q9JJ48 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Zc3h8Q9JJ48 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Zc3h8Q9JJ48 Amer2-203ENSMUST00000225247 2662 ntBASIC22.14■■□□□ 1.14
Zc3h8Q9JJ48 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Zc3h8Q9JJ48 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Zc3h8Q9JJ48 Gm7432-201ENSMUST00000210343 879 ntBASIC22.14■■□□□ 1.13
Zc3h8Q9JJ48 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Zc3h8Q9JJ48 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Zc3h8Q9JJ48 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Zc3h8Q9JJ48 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Zc3h8Q9JJ48 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Zc3h8Q9JJ48 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h8Q9JJ48 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Zc3h8Q9JJ48 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h8Q9JJ48 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.08■■□□□ 1.13
Zc3h8Q9JJ48 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zc3h8Q9JJ48 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.08■■□□□ 1.12
Zc3h8Q9JJ48 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Zc3h8Q9JJ48 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Zc3h8Q9JJ48 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
Zc3h8Q9JJ48 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zc3h8Q9JJ48 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zc3h8Q9JJ48 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
Zc3h8Q9JJ48 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Zc3h8Q9JJ48 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.05■■□□□ 1.12
Zc3h8Q9JJ48 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h8Q9JJ48 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h8Q9JJ48 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zc3h8Q9JJ48 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Zc3h8Q9JJ48 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Zc3h8Q9JJ48 Gm11599-201ENSMUST00000118720 878 ntBASIC22.03■■□□□ 1.12
Zc3h8Q9JJ48 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.03■■□□□ 1.12
Zc3h8Q9JJ48 Particl-201ENSMUST00000205370 1560 ntBASIC22.03■■□□□ 1.12
Zc3h8Q9JJ48 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zc3h8Q9JJ48 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Zc3h8Q9JJ48 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms