Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Praf2Q9JIG8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.17■□□□□ 0.98
Praf2Q9JIG8 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.17■□□□□ 0.98
Praf2Q9JIG8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Praf2Q9JIG8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Praf2Q9JIG8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Praf2Q9JIG8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Praf2Q9JIG8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Praf2Q9JIG8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Praf2Q9JIG8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Praf2Q9JIG8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Praf2Q9JIG8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Praf2Q9JIG8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Praf2Q9JIG8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Praf2Q9JIG8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Praf2Q9JIG8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Praf2Q9JIG8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Praf2Q9JIG8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Praf2Q9JIG8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Praf2Q9JIG8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Praf2Q9JIG8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Praf2Q9JIG8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Praf2Q9JIG8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Praf2Q9JIG8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Praf2Q9JIG8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Praf2Q9JIG8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Praf2Q9JIG8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Praf2Q9JIG8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Praf2Q9JIG8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Praf2Q9JIG8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.1■□□□□ 0.97
Praf2Q9JIG8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Praf2Q9JIG8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.09■□□□□ 0.97
Praf2Q9JIG8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Praf2Q9JIG8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Praf2Q9JIG8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Praf2Q9JIG8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Praf2Q9JIG8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.09■□□□□ 0.97
Praf2Q9JIG8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Praf2Q9JIG8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Praf2Q9JIG8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Praf2Q9JIG8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Praf2Q9JIG8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Praf2Q9JIG8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Praf2Q9JIG8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Praf2Q9JIG8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.06■□□□□ 0.96
Praf2Q9JIG8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Praf2Q9JIG8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.06■□□□□ 0.96
Praf2Q9JIG8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Praf2Q9JIG8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Praf2Q9JIG8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Praf2Q9JIG8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Praf2Q9JIG8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Praf2Q9JIG8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Praf2Q9JIG8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Praf2Q9JIG8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Praf2Q9JIG8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Praf2Q9JIG8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Praf2Q9JIG8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Praf2Q9JIG8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.02■□□□□ 0.96
Praf2Q9JIG8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Praf2Q9JIG8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Praf2Q9JIG8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Praf2Q9JIG8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Praf2Q9JIG8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Praf2Q9JIG8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Praf2Q9JIG8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.01■□□□□ 0.95
Praf2Q9JIG8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21■□□□□ 0.95
Praf2Q9JIG8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21■□□□□ 0.95
Praf2Q9JIG8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Praf2Q9JIG8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Praf2Q9JIG8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Praf2Q9JIG8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Praf2Q9JIG8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Praf2Q9JIG8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Praf2Q9JIG8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Praf2Q9JIG8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Praf2Q9JIG8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Praf2Q9JIG8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Praf2Q9JIG8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Praf2Q9JIG8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Praf2Q9JIG8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Praf2Q9JIG8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Praf2Q9JIG8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Praf2Q9JIG8 Gm25262-201ENSMUST00000174934 133 ntBASIC20.94■□□□□ 0.94
Praf2Q9JIG8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Praf2Q9JIG8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Praf2Q9JIG8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Praf2Q9JIG8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Praf2Q9JIG8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Praf2Q9JIG8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Praf2Q9JIG8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Praf2Q9JIG8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Praf2Q9JIG8 Gm27322-201ENSMUST00000184007 104 ntBASIC20.93■□□□□ 0.94
Praf2Q9JIG8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Praf2Q9JIG8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Praf2Q9JIG8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Praf2Q9JIG8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Praf2Q9JIG8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.91■□□□□ 0.94
Praf2Q9JIG8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Praf2Q9JIG8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms