Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.86■■■□□ 2.69
U2af1Q9D883 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
U2af1Q9D883 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
U2af1Q9D883 Gm30023-201ENSMUST00000197970 889 ntBASIC31.85■■■□□ 2.69
U2af1Q9D883 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
U2af1Q9D883 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.83■■■□□ 2.69
U2af1Q9D883 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
U2af1Q9D883 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.82■■■□□ 2.68
U2af1Q9D883 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
U2af1Q9D883 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
U2af1Q9D883 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
U2af1Q9D883 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
U2af1Q9D883 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
U2af1Q9D883 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
U2af1Q9D883 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
U2af1Q9D883 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
U2af1Q9D883 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
U2af1Q9D883 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.74■■■□□ 2.67
U2af1Q9D883 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
U2af1Q9D883 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
U2af1Q9D883 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
U2af1Q9D883 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
U2af1Q9D883 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.73■■■□□ 2.67
U2af1Q9D883 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
U2af1Q9D883 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
U2af1Q9D883 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.71■■■□□ 2.67
U2af1Q9D883 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
U2af1Q9D883 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
U2af1Q9D883 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
U2af1Q9D883 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
U2af1Q9D883 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.7■■■□□ 2.67
U2af1Q9D883 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
U2af1Q9D883 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
U2af1Q9D883 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.69■■■□□ 2.66
U2af1Q9D883 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.69■■■□□ 2.66
U2af1Q9D883 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
U2af1Q9D883 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
U2af1Q9D883 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
U2af1Q9D883 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
U2af1Q9D883 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
U2af1Q9D883 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
U2af1Q9D883 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
U2af1Q9D883 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
U2af1Q9D883 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.65■■■□□ 2.66
U2af1Q9D883 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
U2af1Q9D883 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
U2af1Q9D883 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
U2af1Q9D883 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.63■■■□□ 2.65
U2af1Q9D883 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
U2af1Q9D883 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
U2af1Q9D883 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
U2af1Q9D883 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
U2af1Q9D883 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
U2af1Q9D883 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
U2af1Q9D883 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
U2af1Q9D883 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.6■■■□□ 2.65
U2af1Q9D883 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
U2af1Q9D883 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.56■■■□□ 2.64
U2af1Q9D883 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
U2af1Q9D883 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
U2af1Q9D883 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
U2af1Q9D883 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.53■■■□□ 2.64
U2af1Q9D883 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
U2af1Q9D883 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
U2af1Q9D883 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
U2af1Q9D883 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
U2af1Q9D883 Gm7432-201ENSMUST00000210343 879 ntBASIC31.5■■■□□ 2.63
U2af1Q9D883 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
U2af1Q9D883 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
U2af1Q9D883 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
U2af1Q9D883 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
U2af1Q9D883 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2af1Q9D883 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
U2af1Q9D883 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
U2af1Q9D883 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.46■■■□□ 2.63
U2af1Q9D883 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
U2af1Q9D883 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
U2af1Q9D883 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
U2af1Q9D883 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
U2af1Q9D883 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.44■■■□□ 2.62
U2af1Q9D883 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
U2af1Q9D883 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.42■■■□□ 2.62
U2af1Q9D883 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
U2af1Q9D883 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
U2af1Q9D883 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
U2af1Q9D883 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
U2af1Q9D883 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
U2af1Q9D883 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.4■■■□□ 2.62
U2af1Q9D883 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.39■■■□□ 2.62
U2af1Q9D883 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.39■■■□□ 2.62
U2af1Q9D883 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.39■■■□□ 2.61
U2af1Q9D883 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
U2af1Q9D883 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
U2af1Q9D883 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
U2af1Q9D883 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
U2af1Q9D883 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
U2af1Q9D883 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.37■■■□□ 2.61
U2af1Q9D883 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.37■■■□□ 2.61
U2af1Q9D883 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
U2af1Q9D883 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms