Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.53■□□□□ 0.72
H2afb1Q9CQ70 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1Q9CQ70 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1Q9CQ70 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb1Q9CQ70 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.52■□□□□ 0.72
H2afb1Q9CQ70 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
H2afb1Q9CQ70 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1Q9CQ70 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1Q9CQ70 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.51■□□□□ 0.71
H2afb1Q9CQ70 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1Q9CQ70 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1Q9CQ70 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1Q9CQ70 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1Q9CQ70 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.49■□□□□ 0.71
H2afb1Q9CQ70 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb1Q9CQ70 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb1Q9CQ70 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb1Q9CQ70 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb1Q9CQ70 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb1Q9CQ70 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb1Q9CQ70 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb1Q9CQ70 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H2afb1Q9CQ70 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
H2afb1Q9CQ70 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H2afb1Q9CQ70 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb1Q9CQ70 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
H2afb1Q9CQ70 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb1Q9CQ70 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.43■□□□□ 0.7
H2afb1Q9CQ70 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb1Q9CQ70 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H2afb1Q9CQ70 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
H2afb1Q9CQ70 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.42■□□□□ 0.7
H2afb1Q9CQ70 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
H2afb1Q9CQ70 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afb1Q9CQ70 Gm45855-201ENSMUST00000212546 880 ntBASIC19.41■□□□□ 0.7
H2afb1Q9CQ70 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H2afb1Q9CQ70 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H2afb1Q9CQ70 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H2afb1Q9CQ70 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
H2afb1Q9CQ70 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.38■□□□□ 0.69
H2afb1Q9CQ70 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.38■□□□□ 0.69
H2afb1Q9CQ70 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb1Q9CQ70 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb1Q9CQ70 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
H2afb1Q9CQ70 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
H2afb1Q9CQ70 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb1Q9CQ70 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
H2afb1Q9CQ70 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H2afb1Q9CQ70 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb1Q9CQ70 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb1Q9CQ70 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb1Q9CQ70 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H2afb1Q9CQ70 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb1Q9CQ70 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
H2afb1Q9CQ70 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb1Q9CQ70 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H2afb1Q9CQ70 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
H2afb1Q9CQ70 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H2afb1Q9CQ70 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
H2afb1Q9CQ70 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afb1Q9CQ70 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H2afb1Q9CQ70 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb1Q9CQ70 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb1Q9CQ70 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb1Q9CQ70 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
H2afb1Q9CQ70 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb1Q9CQ70 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
H2afb1Q9CQ70 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb1Q9CQ70 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb1Q9CQ70 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.3■□□□□ 0.68
H2afb1Q9CQ70 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
H2afb1Q9CQ70 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
H2afb1Q9CQ70 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb1Q9CQ70 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb1Q9CQ70 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb1Q9CQ70 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H2afb1Q9CQ70 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
H2afb1Q9CQ70 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb1Q9CQ70 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.26■□□□□ 0.67
H2afb1Q9CQ70 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb1Q9CQ70 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms