Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Mir6538-201ENSMUST00000183713 110 ntBASIC30.11■■■□□ 2.41
Trim34aQ99PP6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Trim34aQ99PP6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trim34aQ99PP6 Gm11175-201ENSMUST00000116172 543 ntBASIC30.1■■■□□ 2.41
Trim34aQ99PP6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.1■■■□□ 2.41
Trim34aQ99PP6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim34aQ99PP6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim34aQ99PP6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Trim34aQ99PP6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.09■■■□□ 2.41
Trim34aQ99PP6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim34aQ99PP6 Particl-201ENSMUST00000205370 1560 ntBASIC30.09■■■□□ 2.41
Trim34aQ99PP6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Trim34aQ99PP6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.08■■■□□ 2.41
Trim34aQ99PP6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Trim34aQ99PP6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim34aQ99PP6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Trim34aQ99PP6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Trim34aQ99PP6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.02■■■□□ 2.4
Trim34aQ99PP6 Gm6311-201ENSMUST00000073790 878 ntBASIC30.02■■■□□ 2.4
Trim34aQ99PP6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Trim34aQ99PP6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Trim34aQ99PP6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Trim34aQ99PP6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Trim34aQ99PP6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30■■■□□ 2.39
Trim34aQ99PP6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim34aQ99PP6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Trim34aQ99PP6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trim34aQ99PP6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim34aQ99PP6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim34aQ99PP6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Trim34aQ99PP6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
Trim34aQ99PP6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim34aQ99PP6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Trim34aQ99PP6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
Trim34aQ99PP6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Trim34aQ99PP6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
Trim34aQ99PP6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Trim34aQ99PP6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trim34aQ99PP6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Trim34aQ99PP6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Trim34aQ99PP6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Trim34aQ99PP6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.91■■■□□ 2.38
Trim34aQ99PP6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Trim34aQ99PP6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Trim34aQ99PP6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
Trim34aQ99PP6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Trim34aQ99PP6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Trim34aQ99PP6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Trim34aQ99PP6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trim34aQ99PP6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trim34aQ99PP6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Trim34aQ99PP6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.86■■■□□ 2.37
Trim34aQ99PP6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trim34aQ99PP6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
Trim34aQ99PP6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29.85■■■□□ 2.37
Trim34aQ99PP6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.84■■■□□ 2.37
Trim34aQ99PP6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Trim34aQ99PP6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Trim34aQ99PP6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Trim34aQ99PP6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Trim34aQ99PP6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Trim34aQ99PP6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Trim34aQ99PP6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Trim34aQ99PP6 Cap2-205ENSMUST00000225824 1634 ntBASIC29.79■■■□□ 2.36
Trim34aQ99PP6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Trim34aQ99PP6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Trim34aQ99PP6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
Trim34aQ99PP6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Trim34aQ99PP6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Trim34aQ99PP6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Trim34aQ99PP6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Trim34aQ99PP6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Trim34aQ99PP6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Trim34aQ99PP6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Trim34aQ99PP6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.72■■■□□ 2.35
Trim34aQ99PP6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Trim34aQ99PP6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Trim34aQ99PP6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Trim34aQ99PP6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Trim34aQ99PP6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Trim34aQ99PP6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Trim34aQ99PP6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC29.67■■■□□ 2.34
Trim34aQ99PP6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Trim34aQ99PP6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Trim34aQ99PP6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Trim34aQ99PP6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Trim34aQ99PP6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Trim34aQ99PP6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Trim34aQ99PP6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Trim34aQ99PP6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Trim34aQ99PP6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Trim34aQ99PP6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Trim34aQ99PP6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Trim34aQ99PP6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.61■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms