Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubqln4Q99NB8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubqln4Q99NB8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubqln4Q99NB8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubqln4Q99NB8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubqln4Q99NB8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubqln4Q99NB8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubqln4Q99NB8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubqln4Q99NB8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubqln4Q99NB8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ubqln4Q99NB8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubqln4Q99NB8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ubqln4Q99NB8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln4Q99NB8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubqln4Q99NB8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln4Q99NB8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln4Q99NB8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ubqln4Q99NB8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln4Q99NB8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubqln4Q99NB8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln4Q99NB8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln4Q99NB8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln4Q99NB8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln4Q99NB8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubqln4Q99NB8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubqln4Q99NB8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.64■■□□□ 1.05
Ubqln4Q99NB8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubqln4Q99NB8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.63■■□□□ 1.05
Ubqln4Q99NB8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubqln4Q99NB8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.63■■□□□ 1.05
Ubqln4Q99NB8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubqln4Q99NB8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubqln4Q99NB8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Ubqln4Q99NB8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln4Q99NB8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.6■■□□□ 1.05
Ubqln4Q99NB8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln4Q99NB8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln4Q99NB8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln4Q99NB8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubqln4Q99NB8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubqln4Q99NB8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ubqln4Q99NB8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln4Q99NB8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln4Q99NB8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ubqln4Q99NB8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.57■■□□□ 1.04
Ubqln4Q99NB8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubqln4Q99NB8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.57■■□□□ 1.04
Ubqln4Q99NB8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubqln4Q99NB8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ubqln4Q99NB8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.55■■□□□ 1.04
Ubqln4Q99NB8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubqln4Q99NB8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubqln4Q99NB8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ubqln4Q99NB8 Gm30023-201ENSMUST00000197970 889 ntBASIC21.54■■□□□ 1.04
Ubqln4Q99NB8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubqln4Q99NB8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln4Q99NB8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.53■■□□□ 1.04
Ubqln4Q99NB8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln4Q99NB8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ubqln4Q99NB8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubqln4Q99NB8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Ubqln4Q99NB8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubqln4Q99NB8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln4Q99NB8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln4Q99NB8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubqln4Q99NB8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.51■■□□□ 1.03
Ubqln4Q99NB8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.5■■□□□ 1.03
Ubqln4Q99NB8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ubqln4Q99NB8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ubqln4Q99NB8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.5■■□□□ 1.03
Ubqln4Q99NB8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubqln4Q99NB8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubqln4Q99NB8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubqln4Q99NB8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubqln4Q99NB8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Ubqln4Q99NB8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.48■■□□□ 1.03
Ubqln4Q99NB8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Ubqln4Q99NB8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ubqln4Q99NB8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln4Q99NB8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln4Q99NB8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln4Q99NB8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubqln4Q99NB8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ubqln4Q99NB8 Nkain2-201ENSMUST00000092602 558 ntBASIC21.46■■□□□ 1.03
Ubqln4Q99NB8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubqln4Q99NB8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ubqln4Q99NB8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ubqln4Q99NB8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ubqln4Q99NB8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
Ubqln4Q99NB8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ubqln4Q99NB8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.44■■□□□ 1.02
Ubqln4Q99NB8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln4Q99NB8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ubqln4Q99NB8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln4Q99NB8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.43■■□□□ 1.02
Ubqln4Q99NB8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln4Q99NB8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln4Q99NB8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln4Q99NB8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln4Q99NB8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms