Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Thumpd1Q99J36 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd1Q99J36 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Thumpd1Q99J36 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd1Q99J36 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd1Q99J36 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Thumpd1Q99J36 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thumpd1Q99J36 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd1Q99J36 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Thumpd1Q99J36 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd1Q99J36 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd1Q99J36 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd1Q99J36 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd1Q99J36 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd1Q99J36 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thumpd1Q99J36 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Thumpd1Q99J36 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd1Q99J36 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.12■□□□□ 0.97
Thumpd1Q99J36 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd1Q99J36 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Gm16148-201ENSMUST00000119653 893 ntBASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd1Q99J36 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd1Q99J36 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd1Q99J36 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Thumpd1Q99J36 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Thumpd1Q99J36 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd1Q99J36 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd1Q99J36 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Thumpd1Q99J36 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Thumpd1Q99J36 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Thumpd1Q99J36 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Gm24804-201ENSMUST00000174982 85 ntBASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21■□□□□ 0.95
Thumpd1Q99J36 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd1Q99J36 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21■□□□□ 0.95
Thumpd1Q99J36 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Thumpd1Q99J36 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd1Q99J36 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Thumpd1Q99J36 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Thumpd1Q99J36 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Thumpd1Q99J36 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Thumpd1Q99J36 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms