Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhga4Q91XY4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhga4Q91XY4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhga4Q91XY4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.25■■□□□ 1.31
Pcdhga4Q91XY4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.25■■□□□ 1.31
Pcdhga4Q91XY4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.24■■□□□ 1.31
Pcdhga4Q91XY4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga4Q91XY4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga4Q91XY4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga4Q91XY4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhga4Q91XY4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
Pcdhga4Q91XY4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga4Q91XY4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga4Q91XY4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga4Q91XY4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhga4Q91XY4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhga4Q91XY4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.19■■□□□ 1.3
Pcdhga4Q91XY4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdhga4Q91XY4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.19■■□□□ 1.3
Pcdhga4Q91XY4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhga4Q91XY4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhga4Q91XY4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga4Q91XY4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga4Q91XY4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Pcdhga4Q91XY4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Pcdhga4Q91XY4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhga4Q91XY4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhga4Q91XY4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pcdhga4Q91XY4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhga4Q91XY4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Pcdhga4Q91XY4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.14■■□□□ 1.29
Pcdhga4Q91XY4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhga4Q91XY4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhga4Q91XY4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhga4Q91XY4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.13■■□□□ 1.29
Pcdhga4Q91XY4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Pcdhga4Q91XY4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Pcdhga4Q91XY4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Pcdhga4Q91XY4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhga4Q91XY4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
Pcdhga4Q91XY4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga4Q91XY4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga4Q91XY4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.11■■□□□ 1.29
Pcdhga4Q91XY4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga4Q91XY4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Pcdhga4Q91XY4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.11■■□□□ 1.29
Pcdhga4Q91XY4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga4Q91XY4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhga4Q91XY4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.1■■□□□ 1.29
Pcdhga4Q91XY4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Pcdhga4Q91XY4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhga4Q91XY4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdhga4Q91XY4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.08■■□□□ 1.29
Pcdhga4Q91XY4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga4Q91XY4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Pcdhga4Q91XY4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhga4Q91XY4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhga4Q91XY4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.07■■□□□ 1.28
Pcdhga4Q91XY4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga4Q91XY4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhga4Q91XY4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhga4Q91XY4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhga4Q91XY4 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.05■■□□□ 1.28
Pcdhga4Q91XY4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhga4Q91XY4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga4Q91XY4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga4Q91XY4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga4Q91XY4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga4Q91XY4 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.04■■□□□ 1.28
Pcdhga4Q91XY4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga4Q91XY4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga4Q91XY4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.03■■□□□ 1.28
Pcdhga4Q91XY4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhga4Q91XY4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 Gm7432-201ENSMUST00000210343 879 ntBASIC23.02■■□□□ 1.28
Pcdhga4Q91XY4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga4Q91XY4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga4Q91XY4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga4Q91XY4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga4Q91XY4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga4Q91XY4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23■■□□□ 1.27
Pcdhga4Q91XY4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23■■□□□ 1.27
Pcdhga4Q91XY4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga4Q91XY4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga4Q91XY4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga4Q91XY4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdhga4Q91XY4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhga4Q91XY4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga4Q91XY4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga4Q91XY4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdhga4Q91XY4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga4Q91XY4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.97■■□□□ 1.27
Pcdhga4Q91XY4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga4Q91XY4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhga4Q91XY4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms