Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25■■□□□ 1.59
Pcdhgb1Q91XX8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgb1Q91XX8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgb1Q91XX8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhgb1Q91XX8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhgb1Q91XX8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhgb1Q91XX8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Pcdhgb1Q91XX8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
Pcdhgb1Q91XX8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgb1Q91XX8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Pcdhgb1Q91XX8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgb1Q91XX8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhgb1Q91XX8 Gm7432-201ENSMUST00000210343 879 ntBASIC24.95■■□□□ 1.58
Pcdhgb1Q91XX8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgb1Q91XX8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.94■■□□□ 1.58
Pcdhgb1Q91XX8 Amer2-203ENSMUST00000225247 2662 ntBASIC24.93■■□□□ 1.58
Pcdhgb1Q91XX8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.93■■□□□ 1.58
Pcdhgb1Q91XX8 Gm30023-201ENSMUST00000197970 889 ntBASIC24.93■■□□□ 1.58
Pcdhgb1Q91XX8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.92■■□□□ 1.58
Pcdhgb1Q91XX8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgb1Q91XX8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgb1Q91XX8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgb1Q91XX8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.91■■□□□ 1.58
Pcdhgb1Q91XX8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgb1Q91XX8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgb1Q91XX8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgb1Q91XX8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhgb1Q91XX8 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.89■■□□□ 1.57
Pcdhgb1Q91XX8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgb1Q91XX8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.87■■□□□ 1.57
Pcdhgb1Q91XX8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgb1Q91XX8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Pcdhgb1Q91XX8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgb1Q91XX8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgb1Q91XX8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgb1Q91XX8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgb1Q91XX8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgb1Q91XX8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhgb1Q91XX8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhgb1Q91XX8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhgb1Q91XX8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.83■■□□□ 1.57
Pcdhgb1Q91XX8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Pcdhgb1Q91XX8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhgb1Q91XX8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgb1Q91XX8 Gm11599-201ENSMUST00000118720 878 ntBASIC24.81■■□□□ 1.56
Pcdhgb1Q91XX8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
Pcdhgb1Q91XX8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.8■■□□□ 1.56
Pcdhgb1Q91XX8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhgb1Q91XX8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhgb1Q91XX8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgb1Q91XX8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgb1Q91XX8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgb1Q91XX8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgb1Q91XX8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgb1Q91XX8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgb1Q91XX8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgb1Q91XX8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgb1Q91XX8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
Pcdhgb1Q91XX8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Pcdhgb1Q91XX8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.76■■□□□ 1.55
Pcdhgb1Q91XX8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgb1Q91XX8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgb1Q91XX8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.76■■□□□ 1.55
Pcdhgb1Q91XX8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdhgb1Q91XX8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgb1Q91XX8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgb1Q91XX8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgb1Q91XX8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Pcdhgb1Q91XX8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Pcdhgb1Q91XX8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhgb1Q91XX8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhgb1Q91XX8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhgb1Q91XX8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgb1Q91XX8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgb1Q91XX8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgb1Q91XX8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
Pcdhgb1Q91XX8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.66■■□□□ 1.54
Pcdhgb1Q91XX8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Pcdhgb1Q91XX8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhgb1Q91XX8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhgb1Q91XX8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhgb1Q91XX8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhgb1Q91XX8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhgb1Q91XX8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.64■■□□□ 1.54
Pcdhgb1Q91XX8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhgb1Q91XX8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhgb1Q91XX8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb1Q91XX8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb1Q91XX8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb1Q91XX8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhgb1Q91XX8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhgb1Q91XX8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhgb1Q91XX8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhgb1Q91XX8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhgb1Q91XX8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb1Q91XX8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb1Q91XX8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb1Q91XX8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb1Q91XX8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb1Q91XX8 Particl-201ENSMUST00000205370 1560 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms