Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ndc1Q8VCB1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.54■■□□□ 1.2
Ndc1Q8VCB1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.53■■□□□ 1.2
Ndc1Q8VCB1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Ndc1Q8VCB1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.53■■□□□ 1.2
Ndc1Q8VCB1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ndc1Q8VCB1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ndc1Q8VCB1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ndc1Q8VCB1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Ndc1Q8VCB1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.51■■□□□ 1.19
Ndc1Q8VCB1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ndc1Q8VCB1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ndc1Q8VCB1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ndc1Q8VCB1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ndc1Q8VCB1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ndc1Q8VCB1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ndc1Q8VCB1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ndc1Q8VCB1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ndc1Q8VCB1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ndc1Q8VCB1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ndc1Q8VCB1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.48■■□□□ 1.19
Ndc1Q8VCB1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.48■■□□□ 1.19
Ndc1Q8VCB1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.48■■□□□ 1.19
Ndc1Q8VCB1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ndc1Q8VCB1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ndc1Q8VCB1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ndc1Q8VCB1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ndc1Q8VCB1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.46■■□□□ 1.19
Ndc1Q8VCB1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ndc1Q8VCB1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.44■■□□□ 1.18
Ndc1Q8VCB1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ndc1Q8VCB1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ndc1Q8VCB1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.44■■□□□ 1.18
Ndc1Q8VCB1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ndc1Q8VCB1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Ndc1Q8VCB1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.43■■□□□ 1.18
Ndc1Q8VCB1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ndc1Q8VCB1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.42■■□□□ 1.18
Ndc1Q8VCB1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ndc1Q8VCB1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ndc1Q8VCB1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ndc1Q8VCB1 Gm30023-201ENSMUST00000197970 889 ntBASIC22.41■■□□□ 1.18
Ndc1Q8VCB1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ndc1Q8VCB1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ndc1Q8VCB1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ndc1Q8VCB1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ndc1Q8VCB1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ndc1Q8VCB1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.39■■□□□ 1.17
Ndc1Q8VCB1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ndc1Q8VCB1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
Ndc1Q8VCB1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ndc1Q8VCB1 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.38■■□□□ 1.17
Ndc1Q8VCB1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ndc1Q8VCB1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ndc1Q8VCB1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ndc1Q8VCB1 Amer2-203ENSMUST00000225247 2662 ntBASIC22.37■■□□□ 1.17
Ndc1Q8VCB1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ndc1Q8VCB1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ndc1Q8VCB1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ndc1Q8VCB1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.36■■□□□ 1.17
Ndc1Q8VCB1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ndc1Q8VCB1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ndc1Q8VCB1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ndc1Q8VCB1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ndc1Q8VCB1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ndc1Q8VCB1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ndc1Q8VCB1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ndc1Q8VCB1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.33■■□□□ 1.17
Ndc1Q8VCB1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ndc1Q8VCB1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ndc1Q8VCB1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ndc1Q8VCB1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ndc1Q8VCB1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Ndc1Q8VCB1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ndc1Q8VCB1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ndc1Q8VCB1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ndc1Q8VCB1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ndc1Q8VCB1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ndc1Q8VCB1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ndc1Q8VCB1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ndc1Q8VCB1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ndc1Q8VCB1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Ndc1Q8VCB1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ndc1Q8VCB1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.26■■□□□ 1.15
Ndc1Q8VCB1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ndc1Q8VCB1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ndc1Q8VCB1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.24■■□□□ 1.15
Ndc1Q8VCB1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ndc1Q8VCB1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.24■■□□□ 1.15
Ndc1Q8VCB1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ndc1Q8VCB1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Ndc1Q8VCB1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ndc1Q8VCB1 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.22■■□□□ 1.15
Ndc1Q8VCB1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ndc1Q8VCB1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Ndc1Q8VCB1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.21■■□□□ 1.15
Ndc1Q8VCB1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ndc1Q8VCB1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.2■■□□□ 1.14
Ndc1Q8VCB1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ndc1Q8VCB1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms