Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.47■□□□□ 0.71
Nup35Q8R4R6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup35Q8R4R6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup35Q8R4R6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup35Q8R4R6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup35Q8R4R6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup35Q8R4R6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup35Q8R4R6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup35Q8R4R6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.44■□□□□ 0.7
Nup35Q8R4R6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup35Q8R4R6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup35Q8R4R6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup35Q8R4R6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nup35Q8R4R6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup35Q8R4R6 Gm8109-201ENSMUST00000194076 746 ntBASIC19.42■□□□□ 0.7
Nup35Q8R4R6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup35Q8R4R6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nup35Q8R4R6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup35Q8R4R6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup35Q8R4R6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup35Q8R4R6 Gm26115-201ENSMUST00000175605 87 ntBASIC19.41■□□□□ 0.7
Nup35Q8R4R6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup35Q8R4R6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup35Q8R4R6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup35Q8R4R6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup35Q8R4R6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup35Q8R4R6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup35Q8R4R6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.39■□□□□ 0.69
Nup35Q8R4R6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup35Q8R4R6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup35Q8R4R6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup35Q8R4R6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup35Q8R4R6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nup35Q8R4R6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup35Q8R4R6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup35Q8R4R6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup35Q8R4R6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup35Q8R4R6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup35Q8R4R6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup35Q8R4R6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup35Q8R4R6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup35Q8R4R6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup35Q8R4R6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nup35Q8R4R6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup35Q8R4R6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup35Q8R4R6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup35Q8R4R6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.32■□□□□ 0.68
Nup35Q8R4R6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Nup35Q8R4R6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup35Q8R4R6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup35Q8R4R6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup35Q8R4R6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup35Q8R4R6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup35Q8R4R6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup35Q8R4R6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup35Q8R4R6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup35Q8R4R6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nup35Q8R4R6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup35Q8R4R6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nup35Q8R4R6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup35Q8R4R6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup35Q8R4R6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup35Q8R4R6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup35Q8R4R6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup35Q8R4R6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup35Q8R4R6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nup35Q8R4R6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup35Q8R4R6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nup35Q8R4R6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup35Q8R4R6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nup35Q8R4R6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup35Q8R4R6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup35Q8R4R6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup35Q8R4R6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup35Q8R4R6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup35Q8R4R6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup35Q8R4R6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup35Q8R4R6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup35Q8R4R6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup35Q8R4R6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nup35Q8R4R6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup35Q8R4R6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nup35Q8R4R6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nup35Q8R4R6 Gm16148-201ENSMUST00000119653 893 ntBASIC19.21■□□□□ 0.67
Nup35Q8R4R6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nup35Q8R4R6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nup35Q8R4R6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms