Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Tmc1Q8R4P5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Tmc1Q8R4P5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tmc1Q8R4P5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tmc1Q8R4P5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29.29■■■□□ 2.28
Tmc1Q8R4P5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
Tmc1Q8R4P5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tmc1Q8R4P5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.29■■■□□ 2.28
Tmc1Q8R4P5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Tmc1Q8R4P5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Tmc1Q8R4P5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Tmc1Q8R4P5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC29.26■■■□□ 2.28
Tmc1Q8R4P5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Tmc1Q8R4P5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Tmc1Q8R4P5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Tmc1Q8R4P5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Tmc1Q8R4P5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
Tmc1Q8R4P5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Tmc1Q8R4P5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Tmc1Q8R4P5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Tmc1Q8R4P5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Tmc1Q8R4P5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Tmc1Q8R4P5 Gm45855-201ENSMUST00000212546 880 ntBASIC29.23■■■□□ 2.27
Tmc1Q8R4P5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Tmc1Q8R4P5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Tmc1Q8R4P5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.22■■■□□ 2.27
Tmc1Q8R4P5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.22■■■□□ 2.27
Tmc1Q8R4P5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC29.22■■■□□ 2.27
Tmc1Q8R4P5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmc1Q8R4P5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Tmc1Q8R4P5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Tmc1Q8R4P5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.18■■■□□ 2.26
Tmc1Q8R4P5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Tmc1Q8R4P5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tmc1Q8R4P5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tmc1Q8R4P5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Tmc1Q8R4P5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Tmc1Q8R4P5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Tmc1Q8R4P5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Tmc1Q8R4P5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Tmc1Q8R4P5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Tmc1Q8R4P5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Tmc1Q8R4P5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.15■■■□□ 2.26
Tmc1Q8R4P5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Tmc1Q8R4P5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.15■■■□□ 2.26
Tmc1Q8R4P5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Tmc1Q8R4P5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Tmc1Q8R4P5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Tmc1Q8R4P5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Tmc1Q8R4P5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Tmc1Q8R4P5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Tmc1Q8R4P5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Tmc1Q8R4P5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Tmc1Q8R4P5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Tmc1Q8R4P5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Tmc1Q8R4P5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Tmc1Q8R4P5 Gm9397-201ENSMUST00000200125 605 ntBASIC29.08■■■□□ 2.25
Tmc1Q8R4P5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tmc1Q8R4P5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tmc1Q8R4P5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
Tmc1Q8R4P5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tmc1Q8R4P5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tmc1Q8R4P5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tmc1Q8R4P5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Tmc1Q8R4P5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Tmc1Q8R4P5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.06■■■□□ 2.24
Tmc1Q8R4P5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Tmc1Q8R4P5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tmc1Q8R4P5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tmc1Q8R4P5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tmc1Q8R4P5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tmc1Q8R4P5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
Tmc1Q8R4P5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tmc1Q8R4P5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Tmc1Q8R4P5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Tmc1Q8R4P5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Tmc1Q8R4P5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Tmc1Q8R4P5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Tmc1Q8R4P5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Tmc1Q8R4P5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Tmc1Q8R4P5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Tmc1Q8R4P5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Tmc1Q8R4P5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Tmc1Q8R4P5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29■■■□□ 2.23
Tmc1Q8R4P5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Tmc1Q8R4P5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Tmc1Q8R4P5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Tmc1Q8R4P5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Tmc1Q8R4P5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Tmc1Q8R4P5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tmc1Q8R4P5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.96■■■□□ 2.23
Tmc1Q8R4P5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tmc1Q8R4P5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Tmc1Q8R4P5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms