Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Rfc3Q8R323 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.93■■□□□ 1.1
Rfc3Q8R323 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.93■■□□□ 1.1
Rfc3Q8R323 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfc3Q8R323 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rfc3Q8R323 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfc3Q8R323 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfc3Q8R323 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfc3Q8R323 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
Rfc3Q8R323 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.91■■□□□ 1.1
Rfc3Q8R323 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfc3Q8R323 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rfc3Q8R323 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfc3Q8R323 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rfc3Q8R323 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfc3Q8R323 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rfc3Q8R323 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rfc3Q8R323 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rfc3Q8R323 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rfc3Q8R323 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rfc3Q8R323 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rfc3Q8R323 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rfc3Q8R323 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Rfc3Q8R323 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rfc3Q8R323 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rfc3Q8R323 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Rfc3Q8R323 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Rfc3Q8R323 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rfc3Q8R323 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rfc3Q8R323 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rfc3Q8R323 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.84■■□□□ 1.09
Rfc3Q8R323 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc3Q8R323 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc3Q8R323 Gm7432-201ENSMUST00000210343 879 ntBASIC21.84■■□□□ 1.09
Rfc3Q8R323 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc3Q8R323 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfc3Q8R323 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.83■■□□□ 1.09
Rfc3Q8R323 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rfc3Q8R323 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfc3Q8R323 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rfc3Q8R323 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.82■■□□□ 1.08
Rfc3Q8R323 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rfc3Q8R323 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc3Q8R323 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc3Q8R323 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc3Q8R323 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc3Q8R323 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfc3Q8R323 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.8■■□□□ 1.08
Rfc3Q8R323 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc3Q8R323 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfc3Q8R323 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc3Q8R323 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfc3Q8R323 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.78■■□□□ 1.08
Rfc3Q8R323 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rfc3Q8R323 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfc3Q8R323 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfc3Q8R323 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfc3Q8R323 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc3Q8R323 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfc3Q8R323 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.76■■□□□ 1.07
Rfc3Q8R323 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.75■■□□□ 1.07
Rfc3Q8R323 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.75■■□□□ 1.07
Rfc3Q8R323 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc3Q8R323 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfc3Q8R323 Gm30023-201ENSMUST00000197970 889 ntBASIC21.74■■□□□ 1.07
Rfc3Q8R323 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rfc3Q8R323 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfc3Q8R323 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.72■■□□□ 1.07
Rfc3Q8R323 Gm11599-201ENSMUST00000118720 878 ntBASIC21.72■■□□□ 1.07
Rfc3Q8R323 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc3Q8R323 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc3Q8R323 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc3Q8R323 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc3Q8R323 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc3Q8R323 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc3Q8R323 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.7■■□□□ 1.06
Rfc3Q8R323 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rfc3Q8R323 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.69■■□□□ 1.06
Rfc3Q8R323 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc3Q8R323 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc3Q8R323 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.69■■□□□ 1.06
Rfc3Q8R323 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
Rfc3Q8R323 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rfc3Q8R323 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc3Q8R323 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc3Q8R323 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc3Q8R323 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc3Q8R323 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc3Q8R323 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc3Q8R323 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.65■■□□□ 1.06
Rfc3Q8R323 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Rfc3Q8R323 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfc3Q8R323 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfc3Q8R323 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms