Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm6311-201ENSMUST00000073790 878 ntBASIC24.94■■□□□ 1.58
Rtn4rl1Q8K0S5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rtn4rl1Q8K0S5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rtn4rl1Q8K0S5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rtn4rl1Q8K0S5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Rtn4rl1Q8K0S5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.91■■□□□ 1.58
Rtn4rl1Q8K0S5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Rtn4rl1Q8K0S5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rtn4rl1Q8K0S5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.9■■□□□ 1.58
Rtn4rl1Q8K0S5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.9■■□□□ 1.58
Rtn4rl1Q8K0S5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.9■■□□□ 1.58
Rtn4rl1Q8K0S5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.89■■□□□ 1.58
Rtn4rl1Q8K0S5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rtn4rl1Q8K0S5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Rtn4rl1Q8K0S5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rtn4rl1Q8K0S5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rtn4rl1Q8K0S5 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.87■■□□□ 1.57
Rtn4rl1Q8K0S5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rtn4rl1Q8K0S5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.87■■□□□ 1.57
Rtn4rl1Q8K0S5 Particl-201ENSMUST00000205370 1560 ntBASIC24.87■■□□□ 1.57
Rtn4rl1Q8K0S5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtn4rl1Q8K0S5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Rtn4rl1Q8K0S5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtn4rl1Q8K0S5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtn4rl1Q8K0S5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Rtn4rl1Q8K0S5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rtn4rl1Q8K0S5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.84■■□□□ 1.57
Rtn4rl1Q8K0S5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rtn4rl1Q8K0S5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtn4rl1Q8K0S5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rtn4rl1Q8K0S5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn4rl1Q8K0S5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn4rl1Q8K0S5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtn4rl1Q8K0S5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn4rl1Q8K0S5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn4rl1Q8K0S5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Rtn4rl1Q8K0S5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rtn4rl1Q8K0S5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.78■■□□□ 1.56
Rtn4rl1Q8K0S5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Rtn4rl1Q8K0S5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Rtn4rl1Q8K0S5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Rtn4rl1Q8K0S5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rtn4rl1Q8K0S5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.74■■□□□ 1.55
Rtn4rl1Q8K0S5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rtn4rl1Q8K0S5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rtn4rl1Q8K0S5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rtn4rl1Q8K0S5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.72■■□□□ 1.55
Rtn4rl1Q8K0S5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn4rl1Q8K0S5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rtn4rl1Q8K0S5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Rtn4rl1Q8K0S5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rtn4rl1Q8K0S5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rtn4rl1Q8K0S5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn4rl1Q8K0S5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn4rl1Q8K0S5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.7■■□□□ 1.54
Rtn4rl1Q8K0S5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rtn4rl1Q8K0S5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rtn4rl1Q8K0S5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.68■■□□□ 1.54
Rtn4rl1Q8K0S5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rtn4rl1Q8K0S5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rtn4rl1Q8K0S5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rtn4rl1Q8K0S5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rtn4rl1Q8K0S5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rtn4rl1Q8K0S5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rtn4rl1Q8K0S5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Rtn4rl1Q8K0S5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rtn4rl1Q8K0S5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rtn4rl1Q8K0S5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rtn4rl1Q8K0S5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rtn4rl1Q8K0S5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rtn4rl1Q8K0S5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rtn4rl1Q8K0S5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rtn4rl1Q8K0S5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Rtn4rl1Q8K0S5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Rtn4rl1Q8K0S5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rtn4rl1Q8K0S5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.61■■□□□ 1.53
Rtn4rl1Q8K0S5 Scarna2-201ENSMUST00000157560 414 ntBASIC24.61■■□□□ 1.53
Rtn4rl1Q8K0S5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.61■■□□□ 1.53
Rtn4rl1Q8K0S5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.61■■□□□ 1.53
Rtn4rl1Q8K0S5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rtn4rl1Q8K0S5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rtn4rl1Q8K0S5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rtn4rl1Q8K0S5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rtn4rl1Q8K0S5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rtn4rl1Q8K0S5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.58■■□□□ 1.53
Rtn4rl1Q8K0S5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.58■■□□□ 1.53
Rtn4rl1Q8K0S5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Rtn4rl1Q8K0S5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rtn4rl1Q8K0S5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rtn4rl1Q8K0S5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Rtn4rl1Q8K0S5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rtn4rl1Q8K0S5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rtn4rl1Q8K0S5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rtn4rl1Q8K0S5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rtn4rl1Q8K0S5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rtn4rl1Q8K0S5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.54■■□□□ 1.52
Rtn4rl1Q8K0S5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rtn4rl1Q8K0S5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rtn4rl1Q8K0S5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rtn4rl1Q8K0S5 Gm4799-201ENSMUST00000095396 657 ntBASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms