Protein–RNA interactions for Protein: Q8CDT9

4933402N03Rik, MCG1612, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933402N03RikQ8CDT9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
4933402N03RikQ8CDT9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
4933402N03RikQ8CDT9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
4933402N03RikQ8CDT9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
4933402N03RikQ8CDT9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.35■■□□□ 1.01
4933402N03RikQ8CDT9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
4933402N03RikQ8CDT9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
4933402N03RikQ8CDT9 Gm24970-201ENSMUST00000175582 82 ntBASIC21.32■■□□□ 1
4933402N03RikQ8CDT9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
4933402N03RikQ8CDT9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
4933402N03RikQ8CDT9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
4933402N03RikQ8CDT9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4933402N03RikQ8CDT9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
4933402N03RikQ8CDT9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.29■■□□□ 1
4933402N03RikQ8CDT9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.29■■□□□ 1
4933402N03RikQ8CDT9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.28■■□□□ 1
4933402N03RikQ8CDT9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
4933402N03RikQ8CDT9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.28■■□□□ 1
4933402N03RikQ8CDT9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
4933402N03RikQ8CDT9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.25■□□□□ 0.99
4933402N03RikQ8CDT9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.25■□□□□ 0.99
4933402N03RikQ8CDT9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
4933402N03RikQ8CDT9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
4933402N03RikQ8CDT9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
4933402N03RikQ8CDT9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
4933402N03RikQ8CDT9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
4933402N03RikQ8CDT9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
4933402N03RikQ8CDT9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
4933402N03RikQ8CDT9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
4933402N03RikQ8CDT9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.22■□□□□ 0.99
4933402N03RikQ8CDT9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.22■□□□□ 0.99
4933402N03RikQ8CDT9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
4933402N03RikQ8CDT9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
4933402N03RikQ8CDT9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
4933402N03RikQ8CDT9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
4933402N03RikQ8CDT9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
4933402N03RikQ8CDT9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
4933402N03RikQ8CDT9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
4933402N03RikQ8CDT9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
4933402N03RikQ8CDT9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
4933402N03RikQ8CDT9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
4933402N03RikQ8CDT9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
4933402N03RikQ8CDT9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
4933402N03RikQ8CDT9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
4933402N03RikQ8CDT9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
4933402N03RikQ8CDT9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
4933402N03RikQ8CDT9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
4933402N03RikQ8CDT9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
4933402N03RikQ8CDT9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
4933402N03RikQ8CDT9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
4933402N03RikQ8CDT9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
4933402N03RikQ8CDT9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.16■□□□□ 0.98
4933402N03RikQ8CDT9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
4933402N03RikQ8CDT9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.15■□□□□ 0.98
4933402N03RikQ8CDT9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
4933402N03RikQ8CDT9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
4933402N03RikQ8CDT9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
4933402N03RikQ8CDT9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
4933402N03RikQ8CDT9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
4933402N03RikQ8CDT9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
4933402N03RikQ8CDT9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
4933402N03RikQ8CDT9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
4933402N03RikQ8CDT9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
4933402N03RikQ8CDT9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
4933402N03RikQ8CDT9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
4933402N03RikQ8CDT9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
4933402N03RikQ8CDT9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
4933402N03RikQ8CDT9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
4933402N03RikQ8CDT9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
4933402N03RikQ8CDT9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
4933402N03RikQ8CDT9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
4933402N03RikQ8CDT9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
4933402N03RikQ8CDT9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
4933402N03RikQ8CDT9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
4933402N03RikQ8CDT9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
4933402N03RikQ8CDT9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
4933402N03RikQ8CDT9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
4933402N03RikQ8CDT9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
4933402N03RikQ8CDT9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
4933402N03RikQ8CDT9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
4933402N03RikQ8CDT9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
4933402N03RikQ8CDT9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
4933402N03RikQ8CDT9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
4933402N03RikQ8CDT9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
4933402N03RikQ8CDT9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
4933402N03RikQ8CDT9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
4933402N03RikQ8CDT9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
4933402N03RikQ8CDT9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms