Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Shisa4Q8CA71 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Shisa4Q8CA71 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Shisa4Q8CA71 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Shisa4Q8CA71 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.44■■■□□ 2.14
Shisa4Q8CA71 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
Shisa4Q8CA71 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.43■■■□□ 2.14
Shisa4Q8CA71 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shisa4Q8CA71 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Shisa4Q8CA71 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shisa4Q8CA71 Gm30023-201ENSMUST00000197970 889 ntBASIC28.41■■■□□ 2.14
Shisa4Q8CA71 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.4■■■□□ 2.14
Shisa4Q8CA71 Nkain2-201ENSMUST00000092602 558 ntBASIC28.4■■■□□ 2.14
Shisa4Q8CA71 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.39■■■□□ 2.14
Shisa4Q8CA71 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Shisa4Q8CA71 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Shisa4Q8CA71 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shisa4Q8CA71 Gm8503-201ENSMUST00000118131 455 ntBASIC28.37■■■□□ 2.13
Shisa4Q8CA71 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.37■■■□□ 2.13
Shisa4Q8CA71 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shisa4Q8CA71 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shisa4Q8CA71 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Shisa4Q8CA71 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shisa4Q8CA71 Gm6821-201ENSMUST00000107540 542 ntBASIC28.32■■■□□ 2.12
Shisa4Q8CA71 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Shisa4Q8CA71 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shisa4Q8CA71 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Shisa4Q8CA71 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.31■■■□□ 2.12
Shisa4Q8CA71 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Shisa4Q8CA71 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Shisa4Q8CA71 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shisa4Q8CA71 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Shisa4Q8CA71 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Shisa4Q8CA71 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Shisa4Q8CA71 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.29■■■□□ 2.12
Shisa4Q8CA71 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.29■■■□□ 2.12
Shisa4Q8CA71 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shisa4Q8CA71 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.27■■■□□ 2.12
Shisa4Q8CA71 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Shisa4Q8CA71 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shisa4Q8CA71 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shisa4Q8CA71 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.26■■■□□ 2.11
Shisa4Q8CA71 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.26■■■□□ 2.11
Shisa4Q8CA71 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Shisa4Q8CA71 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.25■■■□□ 2.11
Shisa4Q8CA71 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Shisa4Q8CA71 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Shisa4Q8CA71 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Shisa4Q8CA71 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Shisa4Q8CA71 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Shisa4Q8CA71 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Shisa4Q8CA71 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Shisa4Q8CA71 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Shisa4Q8CA71 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Shisa4Q8CA71 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Shisa4Q8CA71 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shisa4Q8CA71 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Shisa4Q8CA71 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shisa4Q8CA71 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Shisa4Q8CA71 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.17■■■□□ 2.1
Shisa4Q8CA71 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Shisa4Q8CA71 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Shisa4Q8CA71 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Shisa4Q8CA71 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Shisa4Q8CA71 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shisa4Q8CA71 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shisa4Q8CA71 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shisa4Q8CA71 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Shisa4Q8CA71 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shisa4Q8CA71 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Shisa4Q8CA71 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shisa4Q8CA71 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shisa4Q8CA71 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.1■■■□□ 2.09
Shisa4Q8CA71 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.1■■■□□ 2.09
Shisa4Q8CA71 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shisa4Q8CA71 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Shisa4Q8CA71 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Shisa4Q8CA71 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shisa4Q8CA71 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
Shisa4Q8CA71 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.08■■■□□ 2.09
Shisa4Q8CA71 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shisa4Q8CA71 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Shisa4Q8CA71 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
Shisa4Q8CA71 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Shisa4Q8CA71 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Shisa4Q8CA71 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Shisa4Q8CA71 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.03■■■□□ 2.08
Shisa4Q8CA71 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Shisa4Q8CA71 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.02■■■□□ 2.08
Shisa4Q8CA71 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
Shisa4Q8CA71 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Shisa4Q8CA71 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Shisa4Q8CA71 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms