Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Cwc22Q8C5N3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cwc22Q8C5N3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Cwc22Q8C5N3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Cwc22Q8C5N3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
Cwc22Q8C5N3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC33.44■■■□□ 2.94
Cwc22Q8C5N3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Cwc22Q8C5N3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
Cwc22Q8C5N3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Cwc22Q8C5N3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Cwc22Q8C5N3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
Cwc22Q8C5N3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.41■■■□□ 2.94
Cwc22Q8C5N3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC33.41■■■□□ 2.94
Cwc22Q8C5N3 Gm30023-201ENSMUST00000197970 889 ntBASIC33.41■■■□□ 2.94
Cwc22Q8C5N3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Cwc22Q8C5N3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Cwc22Q8C5N3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
Cwc22Q8C5N3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Cwc22Q8C5N3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Cwc22Q8C5N3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC33.37■■■□□ 2.93
Cwc22Q8C5N3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Cwc22Q8C5N3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cwc22Q8C5N3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC33.36■■■□□ 2.93
Cwc22Q8C5N3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cwc22Q8C5N3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Cwc22Q8C5N3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Cwc22Q8C5N3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC33.33■■■□□ 2.93
Cwc22Q8C5N3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Cwc22Q8C5N3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
Cwc22Q8C5N3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Cwc22Q8C5N3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Cwc22Q8C5N3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC33.3■■■□□ 2.92
Cwc22Q8C5N3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Cwc22Q8C5N3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cwc22Q8C5N3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cwc22Q8C5N3 Gm6821-201ENSMUST00000107540 542 ntBASIC33.28■■■□□ 2.92
Cwc22Q8C5N3 Gm8503-201ENSMUST00000118131 455 ntBASIC33.28■■■□□ 2.92
Cwc22Q8C5N3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Cwc22Q8C5N3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Cwc22Q8C5N3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
Cwc22Q8C5N3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.92
Cwc22Q8C5N3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cwc22Q8C5N3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cwc22Q8C5N3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cwc22Q8C5N3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cwc22Q8C5N3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Cwc22Q8C5N3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cwc22Q8C5N3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Cwc22Q8C5N3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cwc22Q8C5N3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC33.22■■■□□ 2.91
Cwc22Q8C5N3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cwc22Q8C5N3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Cwc22Q8C5N3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
Cwc22Q8C5N3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC33.18■■■□□ 2.9
Cwc22Q8C5N3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Cwc22Q8C5N3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Cwc22Q8C5N3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC33.17■■■□□ 2.9
Cwc22Q8C5N3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC33.16■■■□□ 2.9
Cwc22Q8C5N3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC33.15■■■□□ 2.9
Cwc22Q8C5N3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Cwc22Q8C5N3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.14■■■□□ 2.9
Cwc22Q8C5N3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC33.14■■■□□ 2.9
Cwc22Q8C5N3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC33.14■■■□□ 2.9
Cwc22Q8C5N3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Cwc22Q8C5N3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Cwc22Q8C5N3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC33.12■■■□□ 2.89
Cwc22Q8C5N3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC33.11■■■□□ 2.89
Cwc22Q8C5N3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC33.11■■■□□ 2.89
Cwc22Q8C5N3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Cwc22Q8C5N3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Cwc22Q8C5N3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Cwc22Q8C5N3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Cwc22Q8C5N3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC33.08■■■□□ 2.89
Cwc22Q8C5N3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Cwc22Q8C5N3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC33.08■■■□□ 2.89
Cwc22Q8C5N3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC33.06■■■□□ 2.88
Cwc22Q8C5N3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC33.05■■■□□ 2.88
Cwc22Q8C5N3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Cwc22Q8C5N3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cwc22Q8C5N3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Cwc22Q8C5N3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Cwc22Q8C5N3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
Cwc22Q8C5N3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC33.02■■■□□ 2.88
Cwc22Q8C5N3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC33.02■■■□□ 2.88
Cwc22Q8C5N3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC33■■■□□ 2.87
Cwc22Q8C5N3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC33■■■□□ 2.87
Cwc22Q8C5N3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Cwc22Q8C5N3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Cwc22Q8C5N3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Cwc22Q8C5N3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Cwc22Q8C5N3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Cwc22Q8C5N3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Cwc22Q8C5N3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Cwc22Q8C5N3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cwc22Q8C5N3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Cwc22Q8C5N3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cwc22Q8C5N3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cwc22Q8C5N3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Cwc22Q8C5N3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cwc22Q8C5N3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms