Protein–RNA interactions for Protein: Q8C4Y3

Nelfb, Negative elongation factor B, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfbQ8C4Y3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NelfbQ8C4Y3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
NelfbQ8C4Y3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NelfbQ8C4Y3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
NelfbQ8C4Y3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NelfbQ8C4Y3 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.43■■□□□ 1.82
NelfbQ8C4Y3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.43■■□□□ 1.82
NelfbQ8C4Y3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
NelfbQ8C4Y3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.42■■□□□ 1.82
NelfbQ8C4Y3 Gm24970-201ENSMUST00000175582 82 ntBASIC26.42■■□□□ 1.82
NelfbQ8C4Y3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NelfbQ8C4Y3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NelfbQ8C4Y3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
NelfbQ8C4Y3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NelfbQ8C4Y3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
NelfbQ8C4Y3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
NelfbQ8C4Y3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NelfbQ8C4Y3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.39■■□□□ 1.82
NelfbQ8C4Y3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.39■■□□□ 1.81
NelfbQ8C4Y3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NelfbQ8C4Y3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NelfbQ8C4Y3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
NelfbQ8C4Y3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.38■■□□□ 1.81
NelfbQ8C4Y3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NelfbQ8C4Y3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NelfbQ8C4Y3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NelfbQ8C4Y3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.37■■□□□ 1.81
NelfbQ8C4Y3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NelfbQ8C4Y3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
NelfbQ8C4Y3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NelfbQ8C4Y3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.36■■□□□ 1.81
NelfbQ8C4Y3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
NelfbQ8C4Y3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.36■■□□□ 1.81
NelfbQ8C4Y3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NelfbQ8C4Y3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NelfbQ8C4Y3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.34■■□□□ 1.81
NelfbQ8C4Y3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NelfbQ8C4Y3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NelfbQ8C4Y3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NelfbQ8C4Y3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NelfbQ8C4Y3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
NelfbQ8C4Y3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
NelfbQ8C4Y3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NelfbQ8C4Y3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.32■■□□□ 1.8
NelfbQ8C4Y3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NelfbQ8C4Y3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
NelfbQ8C4Y3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NelfbQ8C4Y3 Gm45855-201ENSMUST00000212546 880 ntBASIC26.3■■□□□ 1.8
NelfbQ8C4Y3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NelfbQ8C4Y3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NelfbQ8C4Y3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NelfbQ8C4Y3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NelfbQ8C4Y3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NelfbQ8C4Y3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NelfbQ8C4Y3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NelfbQ8C4Y3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NelfbQ8C4Y3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
NelfbQ8C4Y3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NelfbQ8C4Y3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NelfbQ8C4Y3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NelfbQ8C4Y3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NelfbQ8C4Y3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NelfbQ8C4Y3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NelfbQ8C4Y3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NelfbQ8C4Y3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NelfbQ8C4Y3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NelfbQ8C4Y3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NelfbQ8C4Y3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
NelfbQ8C4Y3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NelfbQ8C4Y3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.18■■□□□ 1.78
NelfbQ8C4Y3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NelfbQ8C4Y3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NelfbQ8C4Y3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NelfbQ8C4Y3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NelfbQ8C4Y3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NelfbQ8C4Y3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
NelfbQ8C4Y3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.15■■□□□ 1.78
NelfbQ8C4Y3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.15■■□□□ 1.78
NelfbQ8C4Y3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NelfbQ8C4Y3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
NelfbQ8C4Y3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
NelfbQ8C4Y3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
NelfbQ8C4Y3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NelfbQ8C4Y3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NelfbQ8C4Y3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NelfbQ8C4Y3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NelfbQ8C4Y3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NelfbQ8C4Y3 Gm30023-201ENSMUST00000197970 889 ntBASIC26.11■■□□□ 1.77
NelfbQ8C4Y3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.11■■□□□ 1.77
NelfbQ8C4Y3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NelfbQ8C4Y3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NelfbQ8C4Y3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NelfbQ8C4Y3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
NelfbQ8C4Y3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NelfbQ8C4Y3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
NelfbQ8C4Y3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NelfbQ8C4Y3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NelfbQ8C4Y3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NelfbQ8C4Y3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NelfbQ8C4Y3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms